Gene Shewana3_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3974 
Symbol 
ID4480188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4773571 
End bp4773843 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content40% 
IMG OID639728590 
Producthypothetical protein 
Protein accessionYP_871598 
Protein GI117922406 
COG category[S] Function unknown 
COG ID[COG3776] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC TGATCAATAT GGGCAAAGCC ATCACTTTAA TCGCGTGGTT GATGATGGCT 
TATAACCTTG TTATGCCTTT TGCAGGCAAT ATCGGCATTA TTCTCAATAT CTTACTTGGT
ATTACTTGCT TGATGCATTG CTTCCAAGTT GCCATCTTCC ATATGCTATT TAAAAACTTG
CTGACACTAC GCAAGCAAGA TTATCTGCAA GTGTTTATCT TCGGCGTATT TAGTTTATTG
AGCTATCGTC GACAGGTGTT GGCGCAGGCG TAA
 
Protein sequence
MSFLINMGKA ITLIAWLMMA YNLVMPFAGN IGIILNILLG ITCLMHCFQV AIFHMLFKNL 
LTLRKQDYLQ VFIFGVFSLL SYRRQVLAQA