Gene Shewana3_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3973 
Symbol 
ID4480187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4772922 
End bp4773569 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID639728589 
Productputative methyltransferase 
Protein accessionYP_871597 
Protein GI117922405 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAATA ATCGTGCAAA CAACAAGCAA GTGACCAAGA GTCAAACGGC CAATAAGAAA 
GCCGGTAGCG GCCAAGTGCG GATCATTGCC GGCCAATGGC GTTCGCGCAA ACTCCCCATC
CATGATTTAG ACGGCCTGCG GCCGACCACA GATAGAGTCC GCGAAACCCT ATTTAACTGG
CTTGCCAATG ATATTGCCCA CGCAAGGGTG CTCGATTGCT TCGGTGGCAG CGGCGCCTTG
GCACTTGAGT CTCTCTCGCG CTACGCCAGT TACGCCAAGA TTATCGAGTT GCAACGTCCT
GCCGCCATGC AACTTAAAGC GAATCTCAAT ACCCTCAAGT GCGACAATGC CGAGGTACTC
AACGCAGATA CCTTAGTCGT GCTGCAAAAT GGCTGCGAGC AAGGGTTTGA TGTGGTGTTT
ATCGATCCAC CTTTCCGTAA AGGCTTGGCA GAAAAAACCA TTCAGCTATT GGATAGCAAA
GGTTGGCTTA ATGATGGTGC GCTAATTTAT GTGGAGATTG AGTCGGAATT AACCCAAATG
GCAGTCCCTG CGACTTGGCA ACCGCTCAAA GACAAGACCG CAGGGCAAGT TAGCTATCGT
TTATACCAAT ACCAAGCCGA AGACTCTCCG GCTAACACCG AGGAATAG
 
Protein sequence
MANNRANNKQ VTKSQTANKK AGSGQVRIIA GQWRSRKLPI HDLDGLRPTT DRVRETLFNW 
LANDIAHARV LDCFGGSGAL ALESLSRYAS YAKIIELQRP AAMQLKANLN TLKCDNAEVL
NADTLVVLQN GCEQGFDVVF IDPPFRKGLA EKTIQLLDSK GWLNDGALIY VEIESELTQM
AVPATWQPLK DKTAGQVSYR LYQYQAEDSP ANTEE