| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3969 |
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| Symbol | |
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| ID | 4480183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4768265 |
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| End bp | 4769122 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639728585 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_871593 |
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| Protein GI | 117922401 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000340759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTC AAACGCAATC AATGGCACTA ACAGTCCCTC AGGGCAGCAG TAGTTTAGAA
GCTTATATCC ATTCAGTGAC TAGCATGACA ATGTTAGACG CTGAGACTGA GTATGAGTTA
GCCAAGCGTT TGCAGGAAAC GGGTGATCTG CAAGCGGCTA AGCAACTGAT TATGTCGCAC
TTACGCTTTG TGGTGCATGT TGCCAAGGGC TATTCAGGTT ACGGTCTGCC ACAGGCGGAT
TTGATCCAAG AAGGCAACAT CGGTCTGATG AAAGCGGTTA AGCGCTTCGA TCCCGATGTG
GGCGTCCGTC TAGTGTCTTT TGCTGTGCAC TGGATTAAAG CCGAAATTCA TGAATATGTG
CTAAAAAACT GGCGCATTGT AAAAGTTGCA ACCACCAAAG CACAACGTAA GTTGTTCTTT
AATATCCGTA AAGCGAAAAC TCGCCTCGGT TGGTTTAGCG ATGATGAAGT CGCAATGGTG
GCAGAAAACT TAGGTGTATC TAAGGCCGAT GTGACTGAGA TGGAATCACG TATGGCAGCG
CAGGATCCTG CGTTTGACCT GAGCAGTGAT AACGATGATG AGCAGGATTT TGCCCCTGTG
CATTATCTTG AGGACCATTC ATCGGATTTA GCCGAAAATA TCGAAAACGA TAACTGGGAA
TCCAATGCTC AAGGTCGTTT ATTATCGGCC ATCAAAACCT TAGACGAGCG TAGTCAGCAC
ATTCTGCGTG CCCGTTGGTT AGATGATGAT AAAACCACAC TGCAGGAATT GGCAGAAACC
TATCAAGTCT CGGCTGAGCG TATTCGCCAG TTAGAGAAAA ACGCCATGAA CAAGCTTAAG
GCTTGTATGG AAGCCTAA
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| Protein sequence | MTFQTQSMAL TVPQGSSSLE AYIHSVTSMT MLDAETEYEL AKRLQETGDL QAAKQLIMSH
LRFVVHVAKG YSGYGLPQAD LIQEGNIGLM KAVKRFDPDV GVRLVSFAVH WIKAEIHEYV
LKNWRIVKVA TTKAQRKLFF NIRKAKTRLG WFSDDEVAMV AENLGVSKAD VTEMESRMAA
QDPAFDLSSD NDDEQDFAPV HYLEDHSSDL AENIENDNWE SNAQGRLLSA IKTLDERSQH
ILRARWLDDD KTTLQELAET YQVSAERIRQ LEKNAMNKLK ACMEA
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