Gene Shewana3_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3967 
Symbol 
ID4480181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4765686 
End bp4766735 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID639728583 
ProductO-succinylbenzoate synthase 
Protein accessionYP_871591 
Protein GI117922399 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTAA CTTCGCTCAG CTTGTACTTA TATCGCCTAC CCTTAGACCG CTTTTTACCC 
GTGGGGAAAC AACGCATCGA CCACAGAACG GGCTTAGTGT TGCAGGCAAA GGCACAAGCA
GAGGGCGAAG AAAGCGAGCA ACAGGTTGAA ATCGCGCCGC TCTCAGGGGT TGATATCGAC
CAGCAGCCAT TGTCCGGTTT TAGCCGCGAG AGCCTAGACG AAGTACAACA GGCCTTAGTG
GCGCTATTGC CCGAGCTGCA AAATCAGCCT ATCGATTACT TGCTCGAGCA GGCCGAAGCG
AGCCCCTATC CGTCCATGGC CTTTGGCTTA AGCCTATTGC ACGCCAAACT CAGCGGAAAA
CTCGAGTCGG TGCGCCCAGT TACCGCCACT GTGCCGTTGA TTTATCAGCC AGTGGATGCG
CCTAAAACTG AATTGATTGC TAACATTGCG AGTCTTGATA GCGGCGCCCG CTCAGTCAAA
GTGAAGGTTG CGCAAACCTC AGTGGAAGAT GAATTAAGCT TGATTTATGG CATCTTAGGC
CAGAGGCCCG ATCTCAAGCT GCGCTTAGAT GCTAATCGCG GCTTTAGCTT AGAACAGGCT
CTCGATTTTG CTGCCTGTTT ACCGCTAGAG AGCATTGAAT ATATTGAGGA ACCTTGCCAG
CATCCGCAGG ATAATCAAAC CCTGTATCGC GCTATTCCTC TGCCCTACGC CTTAGATGAA
TCCCTCAATG AGCCGGATTA TCAATTTGTG ATGCACGAGG GACTCACGGC ACTCATCATC
AAACCCATGC TACTTGGCAG TATTGAAAAA CTTCAGCGCC TTATCGACGA GGCCCACAGC
CATGGCGTGC GCTGTATCAT AAGCTCAAGC CTTGAGACCA GCTTAGGCAT CAATGACTTG
GCCCATTTAG CCGCCATACT GACGCCCGAT GAAATCCCAG GGCTCGATAC TTTGAGCGCC
TTCAGCCAAG ACTTAAGCGT ACCAAGCGGT AAGCCCCAAT GCTTAAAGCT TCATCAACTT
AAACTTGTCG CCAGTACGCA GCAGGATTAA
 
Protein sequence
MILTSLSLYL YRLPLDRFLP VGKQRIDHRT GLVLQAKAQA EGEESEQQVE IAPLSGVDID 
QQPLSGFSRE SLDEVQQALV ALLPELQNQP IDYLLEQAEA SPYPSMAFGL SLLHAKLSGK
LESVRPVTAT VPLIYQPVDA PKTELIANIA SLDSGARSVK VKVAQTSVED ELSLIYGILG
QRPDLKLRLD ANRGFSLEQA LDFAACLPLE SIEYIEEPCQ HPQDNQTLYR AIPLPYALDE
SLNEPDYQFV MHEGLTALII KPMLLGSIEK LQRLIDEAHS HGVRCIISSS LETSLGINDL
AHLAAILTPD EIPGLDTLSA FSQDLSVPSG KPQCLKLHQL KLVASTQQD