Gene Shewana3_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3966 
Symbol 
ID4480180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4764860 
End bp4765663 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content51% 
IMG OID639728582 
Productalpha/beta hydrolase fold 
Protein accessionYP_871590 
Protein GI117922398 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCG TGGCCCGTTA CGGGGAAGTA TCAATGCCAA ACTTAGTCCT GCTTCACGGC 
TTTTTAGGGA CTAAGGCCGA TTGGCTGCCG CTTATCCCCG CACTGAGCCA GCATTTTCAC
TGTATCTGCC TCGATTTACC CGGACACGGC GATAATCAGC ATGAGCTGCC ATCGACGCTC
GCCAATGGTT TTGAGCATTG TGTTCAAGAC ATTATCAGCC GCCTCGATCG CCTTGGTATT
GAATCCTTTT ATCTCTACGG TTATTCCCTC GGCGGCCGCA TCGCTCTGCA CCTTGCAAAG
GCGTATCCGC AGCGCGTTTT GAGCTTATGG CTAGAGTCCT GTCATCCCGG GCTAACCGAT
ACCGCAGAGC AAGCCGCACG CAGTAAAAAC GACAACTTGT GGGCCAAACG CTTACTCAGC
TTAAGCAGTC GGGATTTTTT ACAGCTTTGG TACCAGCAAG CGGTGTTTGC CGATATGTCC
GACAAGGCAC GGCATGCCTT GGTAGCAAAA CGTGCGTCGC TGCTCGACCA ACATCCCAAG
CAGACACTAA AACAGATCTT TTTGGCCACA TCGCTGGCTC GCCAAGCCTC TCTCTGGGAT
GTACCTGAAA GCCTTGGCTA TGAATGCCAT TTTTTTGCTG GCAGCCAAGA TGCTAAATTC
ACTGCCATAG CAAAGGATTG GCAAGCACAA CAACCCATCA TCTTGCATCA GATTGAACAG
GCTGGGCATA ACATACATCA GGCCAATCCC ACGGCATTAG TCGCCTGCTT AAGCGCACTA
AAGCTTAAAA AATCGATGAC TTGA
 
Protein sequence
MPTVARYGEV SMPNLVLLHG FLGTKADWLP LIPALSQHFH CICLDLPGHG DNQHELPSTL 
ANGFEHCVQD IISRLDRLGI ESFYLYGYSL GGRIALHLAK AYPQRVLSLW LESCHPGLTD
TAEQAARSKN DNLWAKRLLS LSSRDFLQLW YQQAVFADMS DKARHALVAK RASLLDQHPK
QTLKQIFLAT SLARQASLWD VPESLGYECH FFAGSQDAKF TAIAKDWQAQ QPIILHQIEQ
AGHNIHQANP TALVACLSAL KLKKSMT