Gene Shewana3_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3961 
Symbol 
ID4480175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4759875 
End bp4760561 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID639728577 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_871585 
Protein GI117922393 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR03149] cytochrome c nitrite reductase, Fe-S protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT CAAAAAGAAG ATTTCTCAAA GGGACATGCG CCCTGTTGGC CGGCGCTTCG 
GGAGCGACTC TGCTCGCGAC TGTTAGTGCT TCGAATGAGG CGAAGGCCGA ACCCAGCGTG
AAGTATGCGC TGATCCACGA TGAGACTAAG TGCATAGGTT GCAAAGCCTG TGAGGTTGCA
TGCCGTGAAA CCAACCATGT GCCCGAGGGC GTGGCGCGGC TGAAGATAGA GCAAACCGGA
CCTTACGGAG AGTATCCAAA CCAGTTTTAT CACTTTAGCC GTAAGTCTTG CCAGCACTGT
GAAGATGCCC CCTGTGTCAA TGTCTGCCCG ACCGGTGCCG CTTTTATCGA TAAAGAGACG
GGAATCGTGT CGGTGGATGC GTGGAAGTGT GTGGGCTGTC AGTATTGTAT TGCGGCTTGT
CCCTACAAAA TTCGCTTTAT CAATCCCGTT ACCCATGCCG CGGACAAGTG TGATTTTTGC
CGTGAGACTA ATCTGGCCCA AGGTAAACAG CCCGCCTGCG TCGCGGCTTG TCCAACTAAG
GCCTTAGTGT TTGGCAACTT AAAGGATCCG AGTTCACAGG TGGTACAAGT GCTGAAGGCT
AACCCGACCC AAAGGGCTAA GGTTGACCTA GGAACGCGGC CAAAACTGTT CCGCATTGTG
GCCAAATCAG GGGAGGTAGC AATATGA
 
Protein sequence
MENSKRRFLK GTCALLAGAS GATLLATVSA SNEAKAEPSV KYALIHDETK CIGCKACEVA 
CRETNHVPEG VARLKIEQTG PYGEYPNQFY HFSRKSCQHC EDAPCVNVCP TGAAFIDKET
GIVSVDAWKC VGCQYCIAAC PYKIRFINPV THAADKCDFC RETNLAQGKQ PACVAACPTK
ALVFGNLKDP SSQVVQVLKA NPTQRAKVDL GTRPKLFRIV AKSGEVAI