Gene Shewana3_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3957 
Symbol 
ID4480171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4756056 
End bp4756667 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID639728573 
ProductTonB family protein 
Protein accessionYP_871581 
Protein GI117922389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAAA ATGCACTCGT TAATCGCACA GGTATTATCC TTGTTAGCGC ACTGATCACC 
TTAGGTTTGT TCGTGTTTAT GGCGCAACTT ATCCATAATC CGCAGCCCTT GAGCGGACAA
GCGAGCGATG CGCCGCAGAT CACTATTTTG ATGACGGAGC GAACGCCAAT TCCGCCGAAG
GAAAGCCGTA AACCTGAGCC ACCTAAACCC ATTCCGGCAA GGGAGCGCGT TACCGCTCAG
GGTGAGAGCA ATCAGCTCGT CGATTTCAAT ACTCAGACTT TTCCCCCTGA AATGCCAACC
CAAACCACAC TCTTTACTCA ATCGGCAATG ACTGCAGAAG CCTTACCTGT GGTGCAAGTG
TCCCCTCGCT ATCCTATTGA TGCGGCACAA AATGGTAAGG AAGGTTATGT AGTCGTGGGA
TTTGATATTA CGGCGGATGG TACTGTTAGC AATGTGCGCG TGCTCGATGC CAACCCGAAG
CGGGTGTTTG ATAAGGCGGC GTTGTCGGCG GTGCAAAACT GGAAATACAA GCCTAAGTTT
GACTCGGGCA AGGCCGTGCC ACAGATGAAT CAACAGGTGC AGCTCGACTT TAAACTGGAT
CAGAAGATTT AA
 
Protein sequence
MGQNALVNRT GIILVSALIT LGLFVFMAQL IHNPQPLSGQ ASDAPQITIL MTERTPIPPK 
ESRKPEPPKP IPARERVTAQ GESNQLVDFN TQTFPPEMPT QTTLFTQSAM TAEALPVVQV
SPRYPIDAAQ NGKEGYVVVG FDITADGTVS NVRVLDANPK RVFDKAALSA VQNWKYKPKF
DSGKAVPQMN QQVQLDFKLD QKI