Gene Shewana3_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3955 
Symbol 
ID4480169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4754385 
End bp4754846 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content50% 
IMG OID639728571 
Producthypothetical protein 
Protein accessionYP_871579 
Protein GI117922387 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0515319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCTA AGCTGAAACG ATTCCTTCAA TCCCACACTC AGGCCATCTC ACCCGAGGAG 
AAAGCCCACC AGCTCAAGTT GGCGGCGGCG AGTATGTTGC TCGAAGTGGT ATTTGCCGAT
GAGACCCTCG CGGCGGAAGA AATGGCGTTA CTGCCGACCT TGCTGACAGA GACATTGTCG
ATGCCAGCGC AGGAAGCCAA TGAACTGATT GAAGAAGCGA AGAAAGCCCA AGGTAATGCT
ACCTCGTTAT TTGAGTTTAC CAATACCATC AATGCAGAAT TTAGCTTAGA GCAAAAGCAA
CAATTGCTGT TAGCTATGTG GCAATTAGCC TATGCCGATG GACAACTCTC CCAGTACGAA
GATCAAATCA TTCGCCGCAC CGCCGATTTG CTGTACCTCA AGCACAGCGA ACTGATCCAG
ATGCGTAATC AGGCTATCGA AGCGACCCAA GCGGCACGCT AA
 
Protein sequence
MIAKLKRFLQ SHTQAISPEE KAHQLKLAAA SMLLEVVFAD ETLAAEEMAL LPTLLTETLS 
MPAQEANELI EEAKKAQGNA TSLFEFTNTI NAEFSLEQKQ QLLLAMWQLA YADGQLSQYE
DQIIRRTADL LYLKHSELIQ MRNQAIEATQ AAR