| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3952 |
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| Symbol | |
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| ID | 4480166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4751369 |
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| End bp | 4752826 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728568 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_871576 |
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| Protein GI | 117922384 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0177147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAG GGGCTGAGTT ACTGGATAGC GAATTTATCC AAGGTTTTTC GGCCTCTCTT
CTCGATGATT ATCTCAATGC CAAAAACTAT GTGCAGGATG TGCCCACCCA GTCACTGCTG
CATATCCGCA GTTTTACCCA CAGGCTGACC GAACTGCTCG GTCAAGATAA AGCCGTTTCC
TTCACCAGTC CTAATCTCTA TGACCGTATC GAGCTGTTAA ACCAAAAGCG GCTGATCGAT
GTGAAGACGA CACGAGCCTT ACATCGTCTG CGTGGCGATG GCAACCGTGG CGCTCACCCT
GAAAAATACC ATTTAACTCA AGAGCAGTTG CTCGCCTTGG CCCAAAAGGC CATCAAGGAT
GTGTTGGCCT TAATTGAGCA CTTGTATCCT AAGGTGCTCG GGCGCGCTGC TCCCGCTTAT
CGTTACCAAG CCAGTGACGC CGTTACCATC AAAGATCTCT GTTACCGCGC TGTGATGGAA
GACGACCCTA ACGCGCAATA TCTTGTGGGG ATCTCTTTTA AAACCAAAGC ATTAATGCTT
AAAGAGCAAG AGCTTGCTTT AGTCGATCAA TCTTATGGTA ATGAAGATGA AAATGGCCCA
GCGGTAAAGG AAGTGGCGCA AAAAGCCAGT GATACCTTTG CTAAAGCCGC CTATTGGTTT
GCCCTTGCGG CGCCAAATCA TTCCGATGCC CTCTATGAAC ATGGGGTTGG GCTTATCCAT
GGCTATCAAG GACAGGCCGA TGCCATTCAG GGGGAAGCTG CAATTGCCAA GGCTGCTCAG
GCGGGTGTCG TCAATGCGAT GGCGTTACTC GGATATTTTT ATCTGGTAGG CAGCGAATCA
TTTAAGCCGG ATTTAGTGCA GGCGAAGCAC TATTTACAAC TGGCGGCCGA GGGTGAGCAG
ACCGAAGCCA TGGCGAATTT AGGTGTGCTT TATTATCAGA CCAAAGATCT GACTCAAGCC
TATCATTTTA TTAGTAAAGC GGCGCAAGCG GGTTATCCCC ATGCCCAGTA TCATTTAGCC
TTAATGCTCG CCAATGGTGA TGGTTGTAAG CGTGATCCTA TCGTGAGTGA GTATTGGATG
GCCGAAGCGG CCGAGCAAGG TCAGCTGGAT GCCATGCTTA CCCGCGCGCA GCACATGCTA
AACGACGAAA GTGGTTTGGG TGGCGATGTG AGTCAGGCGG AGCGTTATCT ACGTGAAGTA
ATTAAATACG GTCACAGCGT GCCAGCCATG ATTGAATTGA GCATGGCACT CGCGGACGGT
ATTTTAGGGC GTATCGATGT GGTGGGCTCT GCGGCGCTGC TCAACCTCGC GCGCCGTCAT
GCTAATGCCA AAGAGACCGA GATCATCGAG CCCCTATGGC AATCACTCGC ATTGCAAGTT
GATACTGTGC TGGAGATGAC CCAAGATCCC GGCGAGATTC AAACCCTTAA GCGCGCAAAA
ACCTTACTAA ACGCTTAG
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| Protein sequence | MGTGAELLDS EFIQGFSASL LDDYLNAKNY VQDVPTQSLL HIRSFTHRLT ELLGQDKAVS
FTSPNLYDRI ELLNQKRLID VKTTRALHRL RGDGNRGAHP EKYHLTQEQL LALAQKAIKD
VLALIEHLYP KVLGRAAPAY RYQASDAVTI KDLCYRAVME DDPNAQYLVG ISFKTKALML
KEQELALVDQ SYGNEDENGP AVKEVAQKAS DTFAKAAYWF ALAAPNHSDA LYEHGVGLIH
GYQGQADAIQ GEAAIAKAAQ AGVVNAMALL GYFYLVGSES FKPDLVQAKH YLQLAAEGEQ
TEAMANLGVL YYQTKDLTQA YHFISKAAQA GYPHAQYHLA LMLANGDGCK RDPIVSEYWM
AEAAEQGQLD AMLTRAQHML NDESGLGGDV SQAERYLREV IKYGHSVPAM IELSMALADG
ILGRIDVVGS AALLNLARRH ANAKETEIIE PLWQSLALQV DTVLEMTQDP GEIQTLKRAK
TLLNA
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