Gene Shewana3_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3947 
Symbol 
ID4480161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4745650 
End bp4746252 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID639728563 
ProductDTW domain-containing protein 
Protein accessionYP_871571 
Protein GI117922379 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGCC ACTATTGCCC TCATTGTCGT TATCCCCTTA CAGTTTGCCT CTGTGCCCAT 
GTACAACCCA TACAGCCGCA AACGCAGCTA GTGATATTGC AACACCCCTC CGAAGTCGAG
CATAAAAAGA ATAGCGTCAA GGTGTTAAGT CTCGTTATCC CTAACACCCA AGTGTATGTG
GGCGAGACGG AAGCGGATTT TGCCTTATTG CGTGAACAAT TGATGGATTG TGGGTGCCCT
GTCTATCTTG TGTATCCCTC TGGGCAGAGT GTGAGTGTCG AACAACAGAG GCTTAACACC
GATTGTGTAC TGTTGTTGCT CGATGGCACC TGGCGAAAAG CCTTTAAAAT CTTGCAACTC
AATCCATGGT TGGCTCAATT GCCAGCGGTG CACTTGGCCG AAGGTTATGC CTCGAGATAC
AAGATCCGCA AATCGAGCCG CAGTGATAGT TTGTCAACCT TAGAAGCGAG TGCTTATATG
CTAAAAGCCC TCGAACCGGA TTTAGATGTG TCGCCTTTAC TGAATGCCTT CGATGCTATG
GTGGCGATGC GCATTCGTTC CATGCCACTT GAGGTTAGGC TGCGTTATCA GAACGGAGAG
TAA
 
Protein sequence
MSRHYCPHCR YPLTVCLCAH VQPIQPQTQL VILQHPSEVE HKKNSVKVLS LVIPNTQVYV 
GETEADFALL REQLMDCGCP VYLVYPSGQS VSVEQQRLNT DCVLLLLDGT WRKAFKILQL
NPWLAQLPAV HLAEGYASRY KIRKSSRSDS LSTLEASAYM LKALEPDLDV SPLLNAFDAM
VAMRIRSMPL EVRLRYQNGE