Gene Shewana3_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3941 
Symbol 
ID4480155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4737956 
End bp4739368 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content53% 
IMG OID639728557 
Productcarboxypeptidase 
Protein accessionYP_871565 
Protein GI117922373 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAT CCTCGGTATC GCGCGCTTTA TCAACATCCT CTGTAGCCAC ATCCTTTGTA 
CCTTATGTGA GTTCACTCGG TGTGAGTCCA TCAAGATTCA CCAAGAGCTT AATCGCCTCT
GCTCTAACTT TGAGTTTGCT GGGGGCAGGG TTAAGTTCTG CCAATGCGGC GCAGCCCGAT
GCGGCTAAGT TGGCGGCGGG TGTGGAGCAA AAGGTGATCG ACTGGCGCCG TGATTTGCAC
CAACATCCTG AGTTATCTAA TCGCGAGTTT CGCACCAGCA AGATTATTGA AAAGCATCTG
AAATCCCTCG GATTAGAAGT GCAAACGGGC ATCGCCCATA CCGGCGTTGT TGCTATCTTG
AAAGGCGGAA AGTTAAAGGG CGGTAAACCC GGTCCCTTGA TTGCGATCCG CGCCGATATG
GATGCTTTGC CCGTGACCGA AGTGGTCGAT GTGCCCTTTG CCTCTAAAGC GACGGATACC
TATCGCGGTA AAACCGTTGG GGTGATGCAT GCCTGCGGTC ACGATACCCA TGTGGCTATG
TTAATGGGCG TGGCCGAGAA CTTAGTGAAA GTGAAAGATA GCCTTGCCGG CGATGTGATG
TTTATCTTCC AACCCGCCGA AGAAGGTGCG CCCGATGGCG AAGAGGGCGG TGCGGAATTA
ATGCTAAAAC AAGGGCTGTT TGCCAAGCGT AAACCCGACC AAGTGTTTGG CATGCATGTG
ACCTCGAGTA TGCCAAGCGG CATGATTGGG GTGCGTAGCG GCCCAGCCAT GGCGAGTGGA
GATTCCTTTA CGATCAAAGT CAAAGGCCGC CAAACCCATG GTTCGCGCCC CTGGAATGGC
GTCGACCCTA TTGTCGCCGC GGCGCAAATT ATTACCAATG TGCAAACCAT TGTCAGTCGT
CAGGTGGATA TTACCAAAGC GCCCGCTGTA GTGAGTTTTG GCGCGGTGAA TGGCGGTATT
CGCTCGAATA TTATTCCCGA TGAAGTGGAA CTGATTGGCA CCATCCGCAC CTTCGATCAA
CCTATGCGTG CCGATATTAA GGTGCGCTTG GCCGAAATCG CCGAGTTATC GGCAAAAACC
TTAGGCGCAA CAGCGACAAC CGAAATCCAT CAAGGTTACC CCGTGGTGGT GAATAATCCC
GAATTGGTCG CCAGTATGCG CCCCGTGCTT GCCAGTGTGG TCGGCGATAA GATGCTGATA
GAGCCAGGAT TAATCACTGG TGCCGAGGAC TTTTCCTTCT ATGCCTTAGA GTCTCCTGGG
ATGTTTTTCT TCCTCGGGGT GACGCCAAAG GGCACAGATC CTGAAACGGC GGCCAGTAAC
CATTCTCCCG CCTTCTATGT GGATGAAAGT GCGTTAAAAG TTGGCGTTGA AGCCATGACC
AAGGTTGCCC TTACGGCACT TAAGGCGCAA TAA
 
Protein sequence
MTVSSVSRAL STSSVATSFV PYVSSLGVSP SRFTKSLIAS ALTLSLLGAG LSSANAAQPD 
AAKLAAGVEQ KVIDWRRDLH QHPELSNREF RTSKIIEKHL KSLGLEVQTG IAHTGVVAIL
KGGKLKGGKP GPLIAIRADM DALPVTEVVD VPFASKATDT YRGKTVGVMH ACGHDTHVAM
LMGVAENLVK VKDSLAGDVM FIFQPAEEGA PDGEEGGAEL MLKQGLFAKR KPDQVFGMHV
TSSMPSGMIG VRSGPAMASG DSFTIKVKGR QTHGSRPWNG VDPIVAAAQI ITNVQTIVSR
QVDITKAPAV VSFGAVNGGI RSNIIPDEVE LIGTIRTFDQ PMRADIKVRL AEIAELSAKT
LGATATTEIH QGYPVVVNNP ELVASMRPVL ASVVGDKMLI EPGLITGAED FSFYALESPG
MFFFLGVTPK GTDPETAASN HSPAFYVDES ALKVGVEAMT KVALTALKAQ