| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3939 |
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| Symbol | |
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| ID | 4480153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4735027 |
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| End bp | 4736490 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728555 |
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| Product | DNA-directed RNA polymerase |
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| Protein accession | YP_871563 |
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| Protein GI | 117922371 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT CCTTTGTAAA ATCATCCTTT ATAACATCAT CTCTGCAGCC GACTAAGTTA
ATGGTCGCAT TAGCCCTAGG CACTAGCTTA GCCTTATCCG GCTGCGCCTC CACCACGGCA
CCTAAACGCG TCGATACTGG CAGCTTTGCC ATGCCAAGTT ACGACAAGTT AGTGCTGGAT
AATGGCCTGA CGGTGTATTT AATGCCGCAG CGCGAAGTGC CGTTGATCAC CTTAAACGCG
GTAGTGCGTG CCGGGGCGGT TAACGACACC ACAGCGGGTA TCGCCCAAAT GACCGCCGAA
GGTTTACTCC TTGGCGCGGC AGGTAAATCC AAGGCCGAGA TTGAGCAGCA AGTGGATTTT
CTTGGTGCTA GCTTAGGGGC CGAAGCCGAC AAAGAAGGCA GTTATCTGGC CGCCGATTTT
ATGGCGAAAG ATACCGATGT GATGCTCGGC TTATTCAGCG CCGCGTTATT AAGCCCCGAC
TTTGATACGG CCGAGTTCGA CAAACTTAAG CAGCGCGCTA TTGCGGGTTT GCAGCAGGAT
AAAGAAAGCC CGCGTGCCGT GATTGGTCGC TACTTCGATA AACTGGTGTT CGGTGCTCAT
CCCTACGGTA ATGCCTCATC GGGTAATCGT GAGTCACTTG AGCAAGTCAC AGTGTCGCAG
CTACGCGCCT TCCATAAGAG CTACTATCAA CCCGCCAATA CCGCATTAAC TGTAGTGGGG
GATTTTGATG TGGCGGCGAT GAAAGCCAAG CTAACCCAGA CTTTTGGTCA GTGGAAAGGC
AGCGAAAAAC TCGTTCAGCC CGACTTAAAC CAAGGTTTAC CTAAGTTAAC CCAGGCCAAA
GTGCTGCTGG TGGATAAGCC AGATGCAATG GAAACCACCT TTGTTATCGG TGGTTTAGGC
ATTAGCCGTG ATAACCCTGA CTATGTTGGG CTAACGGTAG TGAACACTAT TTTAGGTGGT
CGCTTTACCT CTTGGCTGAA CGATGAGCTG CGGGTGAATG CAGGCTTAAC CTATGGCGCG
CGCTCTGGTT TTAGTCCTTA TACCGATGCA GGTGTGTTTA CCATTAGCAC CTTCACTAAG
ACGGAAACCA CTCAAGAAGC GATTGATTTA GCGCTGAAAA CCTATGCTCG TTTATGGGAG
AAAGGCGTCG ACCAAGCGAC TCTTGATTCG GCTAAGGCCT ATGTTAAAGG TCAGTTCCCG
CCTAAGTTTG AGACCTCGGG CCAATTGGCT GGACTCTTAT CAGGCATGTA TCTCTACGGC
TTCGATGATA AGTTTATCAA CGAGTTCCAA GCCAAAGTGG ATGGCTTAAC CTTAGAAGAA
ACCCAAAGGT TAGTGAAAAC TTACTTCCCG CAAAAGGACT TACAGTTTGT GCTGATTGGC
AACGCCAGCA AGATTGCGCC TATCGCGGCC AAGTATGGCC AAGTGCAAGC CGTCGATATT
AATGCGGTGG GTTTTGGTCA ATAA
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| Protein sequence | MKLSFVKSSF ITSSLQPTKL MVALALGTSL ALSGCASTTA PKRVDTGSFA MPSYDKLVLD
NGLTVYLMPQ REVPLITLNA VVRAGAVNDT TAGIAQMTAE GLLLGAAGKS KAEIEQQVDF
LGASLGAEAD KEGSYLAADF MAKDTDVMLG LFSAALLSPD FDTAEFDKLK QRAIAGLQQD
KESPRAVIGR YFDKLVFGAH PYGNASSGNR ESLEQVTVSQ LRAFHKSYYQ PANTALTVVG
DFDVAAMKAK LTQTFGQWKG SEKLVQPDLN QGLPKLTQAK VLLVDKPDAM ETTFVIGGLG
ISRDNPDYVG LTVVNTILGG RFTSWLNDEL RVNAGLTYGA RSGFSPYTDA GVFTISTFTK
TETTQEAIDL ALKTYARLWE KGVDQATLDS AKAYVKGQFP PKFETSGQLA GLLSGMYLYG
FDDKFINEFQ AKVDGLTLEE TQRLVKTYFP QKDLQFVLIG NASKIAPIAA KYGQVQAVDI
NAVGFGQ
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