Gene Shewana3_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3938 
Symbol 
ID4480152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4732900 
End bp4734945 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content50% 
IMG OID639728554 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_871562 
Protein GI117922370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGGA GACATCTAGT GAAGAAGGCA GGAATTATAC TGCTGAGTCT GCTAATGCCC 
CTCAGTACGG CATTTGCAGA AGCCAGCAAA CCACTCTCAG TCGAATTACT TTGGCAACTC
AAGCGCATAG GTAGCCCAGT GGTGTCCTCC ACGGGCGAGC ACATTATTGC GCCTGTGACT
GAATACGACC TTAAAGAAGA CAAGGGTTCA ACCCAACTGT GGCGCTTCGA CGGTGAAGGT
AAAAATAACC GTGCGATTAC CGCCAAAGGC TTAAAAGTCA GCGAGCCAGT GTTTTCGCCA
GACGGCAAAA CCTTAGCCTT TATCAGCGAA CGTAACGATG ACGACGCGGG CCAAATTTAC
CTGTTACCTA TGGATGGCCC GGGTGAAGCC AGCAAACTCA CGGATATACC CACTGGCGTC
AATGGCATCA AGTGGGTTGG CAAGCATTTG TATTTTATCA GCAATATCTT CCCTGAGCAG
AATTGGGAGC AAATGAAGGC CCAGCTTAAG ACTGATAAAG ATAATAAAGT CTCCGCCCGC
CAGTGGAATG CGCTGCCCTA TTCGCAGTTC GATCATTGGT TAGATGAACG CCGTCAGGCC
CATGTATTTA GGATCCCAGC CACAGGCGGC GCGGTTGAAG CCGTGACTCA GCCTTTAGGC
CATGAACTGC CACGCTCAAG CCAAAGCAGT TCAAGTTATG ATATTTCCCC CGATGAACGC
TTAATTGCCT TCAGCGCCTA TGGTTCGGAT AATCGCGTCG ACCCTAAGTT AGACTTGTTT
CTCGCCACCA TTGGCGGTAG CAAGGCTGAA AACATCACTC CAGATAACCC AGCGCCGGAT
CTGAACCCAA CATTTAGCCC TAACGGCAAA ACCCTCGCCT TTACTCGGCA AAAAATCCCC
GGATTTTATG CCGATACCGC AAGGTTGATG CTGCTGGATG TGAGCAGTCG CAAACTCACC
ACGCTCACCG CGGATTGGGA TCGCTCAGTG TCTCAATTCG AGTGGACACC CGACAGCAAG
GGCTTCTATG CCAGCATTGA TGATGCAGCG ACAAACCGTA TTTATCATAT CGATGCCAAG
AGCGGTAAGG CCAAGGCCAT CACACAAGCC ACCGACTATA GCCAACCTGC TATCGCTAAA
GATGGTCAGT TGATTGCGAC TAATCAAAGC TTTTTGTATC CCGCGCGTTT AGTCAGCATC
AACCCTCGCA ATGGTAAAAC CGAGCGTTTA GAGCAGTTTA ACGACGAGAT TTTAAAGGAT
GTCGATTTAG GCACCTATGA GTCGGTCACC TACAAGGGTT ATCAGGGCCA AGACATTCAA
ATGTGGGTGC ACTATCCACC TGGGTTCGAT CGCAGCAAAA AGTACCCGCT GTTTATGTTG
ATCCACGGCG GCCCACACAA CGCCATTAGC GATGGTTTCC ACTTCCGCTG GAATGCGCAA
ACCTTTGCCT CTTGGGGTTA TGTCACCGCG TGGCCAAACT TCCACGGTTC TAGCGGCTTT
GGACAAGAGT TTGCCGATGC CATTAACCCA GATTGGAAAA ACAAATCCCT CGAAGACGCG
CTCAAAGCCG CAGACTGGTT TAAACAACAA AGTTGGATCG ATAGCGAGCG TATGGTCGCC
GGCGGCGCCA GCTATGGCGG CTACTTAACC TCGATTATTT TAGGCCAGCC GCATCCCTTC
AAGGCACTGC TGATCCACGC GGCGGTGTAC GACATGTACT CACAAATGTC GGCGGACTTT
GCCGTTCACA GCACCCGCTT TGGTAACTAC TGGGATAATC CTGAGCTGTA TAAAGCCATT
TCGCCCCATT ACTTTGCCGC CAACTTTAAC ACCCCAACCT TAGTCAGCCA TGGGCAACTC
GATTATCGTG TACCCGTCGG CCAAGGTTTT GAGCTGTTCC GTACTCTGCA AACCCGTAAT
GTCGAATCGC GGATGATCTA TTTCCCCGAT GAAAACCATT GGATTATGAA GCCCAACAAC
TCCATCTACT GGTATAACCA AGTGAAGGAT TGGATGACCC ACTACGCTAA GCCCGGTGCC
CAATAA
 
Protein sequence
MIRRHLVKKA GIILLSLLMP LSTAFAEASK PLSVELLWQL KRIGSPVVSS TGEHIIAPVT 
EYDLKEDKGS TQLWRFDGEG KNNRAITAKG LKVSEPVFSP DGKTLAFISE RNDDDAGQIY
LLPMDGPGEA SKLTDIPTGV NGIKWVGKHL YFISNIFPEQ NWEQMKAQLK TDKDNKVSAR
QWNALPYSQF DHWLDERRQA HVFRIPATGG AVEAVTQPLG HELPRSSQSS SSYDISPDER
LIAFSAYGSD NRVDPKLDLF LATIGGSKAE NITPDNPAPD LNPTFSPNGK TLAFTRQKIP
GFYADTARLM LLDVSSRKLT TLTADWDRSV SQFEWTPDSK GFYASIDDAA TNRIYHIDAK
SGKAKAITQA TDYSQPAIAK DGQLIATNQS FLYPARLVSI NPRNGKTERL EQFNDEILKD
VDLGTYESVT YKGYQGQDIQ MWVHYPPGFD RSKKYPLFML IHGGPHNAIS DGFHFRWNAQ
TFASWGYVTA WPNFHGSSGF GQEFADAINP DWKNKSLEDA LKAADWFKQQ SWIDSERMVA
GGASYGGYLT SIILGQPHPF KALLIHAAVY DMYSQMSADF AVHSTRFGNY WDNPELYKAI
SPHYFAANFN TPTLVSHGQL DYRVPVGQGF ELFRTLQTRN VESRMIYFPD ENHWIMKPNN
SIYWYNQVKD WMTHYAKPGA Q