Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3926 |
Symbol | |
ID | 4480140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4719399 |
End bp | 4720736 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639728542 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_871550 |
Protein GI | 117922358 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAG TTATTCAAAC GCTCAATCGC GCGATCGCAA CGCCTTATCA AGCGAATATT ACCGTCCCTA ACTGGATGCT CAGCTCGATG GAACGAGTCA TGCAGTATTA TGTCGATAAG AATCTTCGCC TCGATACGCT CTCCGCCGAC ATCATGCCCG CCCCGGTCGA AGGTAAAAAG TACATGCTTT ATGCCCATGT GCCCTTCTGC CATACCTTGT GTTCTTACTG TACCTTCCAC CGTTTTATGT TTAAGGAAGA CAAGGCGCGC GCTTACTTTA TCTCTCTGCG TAAAGAGATG GAGATGGTCA AAGCCTTAGG CTATGACTTT GAATCTATGT ACATTGGCGG CGGCACCACC ACAGTATTAG AAGACGAACT CGCCCGTACT ATTGAGCATG CCAAGACCCT ATTCCCAAGC ATTAAAGAAG TGTCTTGCGA GTCGGATCCA CAGCATTTAG ACAGCCCAGG CTTTAAGCAA CTCAAGGGCT TAGTGGATCG CATGTCCATC GGCGTCCAAA GCTTTAACGA CGACATTTTA AAAATGACCG ATCGCCTCGA AAAATTCGGC ACAGGTCAGC AAACCTTCGA CAAGATCATG GCGGCCAAAG AGCTGTTCCC TATTATCAAC GTCGACCTGA TTTTTGGCTT TCGCGGTCAA ACCGATGAAG TGATCCAGCA CGACTTAGAC ATGGCATCGC GCCTCGACCC AAGACAGATC ACCACCTATC CGCTGATGAT CACGCACCAA ACGCGTAAGA GTGTTAAAGG TAAACTGGCA GCGCCACAGG CGGATATGGC CAACCAATAT CGCCAGATCT TAAACCGTTT AAATGGTCAA TATAATCAGT TGTCTGCATG GGCCTTTGGT AAGGCGAATG ACGAAGGCTT CGACGAATAT GTTATCGACT ACGATGAGTA TTTAGGGGTG GGTTCAGGCT CATTTAGCTT CCTGAACGAC ACTTTATACG TCAACACTTT CTCGCTGCGT AAATACCAAG AGCGGATCGC CGCCGGCAAG ATGGGCGTCG AGCAACAGAA AAACTACAGC AAAAAGGACG TGATGCAGTA TCGCTTCCTG CTGGGGATGT TCTCTGGTCG CCTATCGCGC AAATACTTCC GCGAAACCTT CGGCGTTAAC TTAGACACAG CCCTGTTTAA GGAAATGACC TCGATGAAAC TGATTGGCGC CATCAAGAAC GACCCAACCG ATCCAGATAA TCTGATCATC ACAGATAACG GTAAGATGAT GGGCCTGTTA ATGATGAAAG AGTTTTACGC CGGCATGGAT AACGTGCGCG CCCAATTGCG TAAGCCACTC AAGCCCTGCG ATATGTAA
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Protein sequence | MSSVIQTLNR AIATPYQANI TVPNWMLSSM ERVMQYYVDK NLRLDTLSAD IMPAPVEGKK YMLYAHVPFC HTLCSYCTFH RFMFKEDKAR AYFISLRKEM EMVKALGYDF ESMYIGGGTT TVLEDELART IEHAKTLFPS IKEVSCESDP QHLDSPGFKQ LKGLVDRMSI GVQSFNDDIL KMTDRLEKFG TGQQTFDKIM AAKELFPIIN VDLIFGFRGQ TDEVIQHDLD MASRLDPRQI TTYPLMITHQ TRKSVKGKLA APQADMANQY RQILNRLNGQ YNQLSAWAFG KANDEGFDEY VIDYDEYLGV GSGSFSFLND TLYVNTFSLR KYQERIAAGK MGVEQQKNYS KKDVMQYRFL LGMFSGRLSR KYFRETFGVN LDTALFKEMT SMKLIGAIKN DPTDPDNLII TDNGKMMGLL MMKEFYAGMD NVRAQLRKPL KPCDM
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