| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3922 |
|---|
| Symbol | |
|---|
| ID | 4480136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4712651 |
|---|
| End bp | 4713634 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639728538 |
|---|
| Product | formate dehydrogenase gamma subunit |
|---|
| Protein accession | YP_871546 |
|---|
| Protein GI | 117922354 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT GGTTCAAACA CATAGGTTTA GCCATAGCAC TGCTGTTTAG TGCCGTGTGT
CTAGCCAATG GTGGTGATGA ACAAGCGCTC CAACCTCAAG CCTCTGATGC CCAAATTTGG
GCACAGCTGA AGGACGGCGC CACGGGATAC ACTACCTCCC AAAGCGAGTT CCACGCACAA
CCGATCAATA CCTATGATCT GCGTGTACTG GAGCTGCGTA GCGACTGGTT AGCGCCGGCC
TTAATGGCGG CGTTATTCGG CATGATCATT ATCTTTGTCT TATTTATCAA GGTGAACGGC
ATCTCCAAGC TACACCATGG TTTTTCGGGC AAGCTAGTGC ATCGCTGGTC AAAGTTCGAC
GTTTCAATCC ACTGGCTCGG TGCGATCCCG TGCTTAATGT TGATTCTAAC GGGCTTAACT
TTGTTAGCGG GTCGTTTCTT CTTCCAACCT TGGTTGGGCG AAGGCATCTG GGAAGCCATA
GTCTATGGCG CGAAGCAAAT CCACGATGTG ATGGCGATTC CGTTCATGAT CGGCTGGGCA
TTGATGACAG TGTTATGGGC GAAGAACCAG CTGCCAAAAA TGTACGACGT GAAATGGTTC
CTCGTTGTTG GTGGTTACAT CAACTTTGGT CCCTTCAAAG GTAAGCACCC TGATGCTGGT
TTTGCTAACG CCGGTGAAAA AATGTGGTTC TGGGCCTTCG CCCTGTTTGG ATTAGTGATT
TCTGCCTCAG GCATGTTGTT ACTGTTCCCA AATCTTTTCG AACCAAGCCG TACCTTAAGC
TTAATCGCGC TGGTATTGCA CTCAGTGAGC GCCATCGTGA TCTGCGCCTT CTCTATCGTG
CACATCTTTA TGGCAACGGT AATGTCAGAA GGCGGTATGG AGTGTATGGT GTCTGGCTAT
TGTGATGAAA ACTGGGCAAC CCAACACCAC AACCTGTGGT ACGACGAAAT CAAAGCCAAC
GGCACTTTGA AATATAAAGA GTAA
|
|---|
| Protein sequence | MNKWFKHIGL AIALLFSAVC LANGGDEQAL QPQASDAQIW AQLKDGATGY TTSQSEFHAQ
PINTYDLRVL ELRSDWLAPA LMAALFGMII IFVLFIKVNG ISKLHHGFSG KLVHRWSKFD
VSIHWLGAIP CLMLILTGLT LLAGRFFFQP WLGEGIWEAI VYGAKQIHDV MAIPFMIGWA
LMTVLWAKNQ LPKMYDVKWF LVVGGYINFG PFKGKHPDAG FANAGEKMWF WAFALFGLVI
SASGMLLLFP NLFEPSRTLS LIALVLHSVS AIVICAFSIV HIFMATVMSE GGMECMVSGY
CDENWATQHH NLWYDEIKAN GTLKYKE
|
|---|
| |