Gene Shewana3_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3921 
Symbol 
ID4480135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4712005 
End bp4712574 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content52% 
IMG OID639728537 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_871545 
Protein GI117922353 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA TGAAATTTTT GTGTGACACC AAGCGCTGCA TCGAATGTAA CGGCTGTGTC 
ACCGCATGTA AAAACGAAAA CGATTCCGCT CTCGAGTGGG GTATCCAACG CCGCCGCGTC
GTGACTATCA ACGATGGTCA ACCCGGTGAA GCTTCAATCT CTGTCGCCTG TATGCATTGC
TCAGACGCGC CATGTATGGC GGTTTGCCCA GCAAACTGCT TCTACAGAAC CGAAGACGGC
ATTGTGCTAC ACAACAAAGA TGCCTGTATT GGTTGCGGTT ACTGCTTGTA CGCCTGTCCA
TTTGGCGCAC CACAGTTCCC GAAAAAAGGT GCCTTTGGTA GCCGCGGTAA GATGGATAAA
TGTACCTTCT GTGCCGGCGG CCCAGAAGAA AACCACTCAG AGGCAGAGCG CCAGAAGTAC
GGCTCAAACC GTATTGCCGA AGGTAAACTG CCAATGTGCG CAGAACTATG TGCGACTAAG
GCCCTGTTAG CGGGTGATGC AGAAGTGGTT TCTAGCATCT TCCGTGAGCG TGTGGCTTAC
CGTGGCGCTA AAAACGCGGC TTGGAATTAA
 
Protein sequence
MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC 
SDAPCMAVCP ANCFYRTEDG IVLHNKDACI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NHSEAERQKY GSNRIAEGKL PMCAELCATK ALLAGDAEVV SSIFRERVAY
RGAKNAAWN