| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3913 |
|---|
| Symbol | |
|---|
| ID | 4480127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4701239 |
|---|
| End bp | 4702900 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639728529 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_871537 |
|---|
| Protein GI | 117922345 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC AAACCCAGCT TGCGCTAAAA CAAGCGCGGC AAAATGTGTT AGCCCAAACG
CAGATTTTAC AGAATCTGAT CCCGCCAACA GTGAGCTACA CCACTGAAGG CACAGTGCTA
ATTATTGGCC CAGAGGATCT GGCACGCCTC GCGGCGGACA AATTGTCCAC TATGGCGAGC
CGTGTGATTT TGGCTAACGA AGCGATTACC AGCCAAGATG AAACCCACCT TGAACAGGTG
ATGGCTGCGG CGACGGATGT CGAAAGCTAC TATAACAAAC TCATTGGCAT TAAAGGATTT
TTAGGTCAAT TCCAAGTCAG TGTCGAGCAT CAAAATGGCG CGGCAGAATT GAGTGTGGTT
GCCATTCGTA AAGCTCATTT CGATTTGATC CTCGATTTAA GCAGCACACC TTGCTTGAAT
TTAGAAATGC TGCCGCCGGG CTATTTCTAT GTCGGTCAAG ACGATGCCAA ACTGGCCGAT
GCGCTGGAGC AACTCCCCGA ACTGGTGGGG CAGTTTGATA AACCCCGTTA CGTAAAAATC
AATGCCGACT TATGCGCCCA TGACCGTAAT GGCATCAATG GCTGTAACCG TTGCCTCAAC
TTCTGCCCCG CCGATGCGAT TAGCAGTGTC GCCAAGAAAA TTGAGGTCGA CCCTTACCTC
TGCCACGGCG CGGGCAGTTG TGCGAGTGCC TGCCCGACGG GTGCCATTGG TTACGACTTA
CCGACGCCAC AGGCACTGCA TTCTTACCTG AATAAGATTA TCAACCGTTA CCGTGAGCAA
GCCCAAACCG CGCCCGTGAT CCTGTTCCAC GACAATGCGG TTGGCGCAAG CTTGATAGGT
GACGACTTAG CCGGGGATGT GCTCCCCGTT GCCCTAGAAG AAATCACCGT TGCCAGCATT
GACCATTGGT TAGCAGCTCT GGCTTGGGGC GCACGCCAAG TGTTAATCCT CAATACCGAG
GCGACAGCTC CCACACTCAC GCAAATGTTG AAAGGTGAAC TCGCTTTAGC CAACAGCATG
TTAGATGAAA TCGGCCAACC GCAGCGCCTG AGCCTTATCG ACCCAAGCAT GCTAACGAAT
TTGGAGCCGC TGCTCGATAT CAGCCTCGAT TGGCCGGTGA TTGTGCCGGG CGCTTTTGCA
CCCACCACCA AACGTAACAC CTTGTTTGAC GCGATTGACC ATCTGAACAG CCAAGCAGGT
GAAATCAACA GTAGTTTAAG TATCAACAAC GTTCCCTACG GCAAAGTCAG CGTCAATGTC
GAGAAATGTA CTCTGTGTAT GTCCTGCGTG GCGATTTGCC CCACCATGGC ATTGCAAGAT
GGTGGCGACA AACCTGCACT ACACTTTATT GAGCAAAACT GTGTTCAATG TGGCTTATGT
GAGGCGGCGT GCCCTGAAAA GGTCATCAGC CTGACGCCAC AAATTAACTT TGATAAAGCT
GCTCGTCAGC AATTACAAAC CCTGAAAGAA GAAGCCCCAT TCGAATGTAT TCGCTGCGGC
TCTCCTTTTG CGACCCAATC TATGGTGCAT CGGATGCTGG ATATGGTCGG CGCGCACAGC
GCATTCTCAG CCAATATTGA ACGACTGAAA ATGTGTGGCG ATTGCCGGGT AAAAGACATG
TTTGAAGACA TTCTTCAAGA TCCTGAAAAG CAACTGCGAT AA
|
|---|
| Protein sequence | MTNQTQLALK QARQNVLAQT QILQNLIPPT VSYTTEGTVL IIGPEDLARL AADKLSTMAS
RVILANEAIT SQDETHLEQV MAAATDVESY YNKLIGIKGF LGQFQVSVEH QNGAAELSVV
AIRKAHFDLI LDLSSTPCLN LEMLPPGYFY VGQDDAKLAD ALEQLPELVG QFDKPRYVKI
NADLCAHDRN GINGCNRCLN FCPADAISSV AKKIEVDPYL CHGAGSCASA CPTGAIGYDL
PTPQALHSYL NKIINRYREQ AQTAPVILFH DNAVGASLIG DDLAGDVLPV ALEEITVASI
DHWLAALAWG ARQVLILNTE ATAPTLTQML KGELALANSM LDEIGQPQRL SLIDPSMLTN
LEPLLDISLD WPVIVPGAFA PTTKRNTLFD AIDHLNSQAG EINSSLSINN VPYGKVSVNV
EKCTLCMSCV AICPTMALQD GGDKPALHFI EQNCVQCGLC EAACPEKVIS LTPQINFDKA
ARQQLQTLKE EAPFECIRCG SPFATQSMVH RMLDMVGAHS AFSANIERLK MCGDCRVKDM
FEDILQDPEK QLR
|
|---|
| |