Gene Shewana3_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3904 
Symbol 
ID4480115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4684749 
End bp4685531 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID639728517 
Productacetylglutamate kinase 
Protein accessionYP_871528 
Protein GI117922336 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.285866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCA ACAACTCAGT ATTAGTTCTT AAAGTCGGCG GCGCCCTGCT GCAGTGTGAA 
ATGGGGATGG CGCGTTTAAT GGATACCGCA GCAGCAATGA TCGCCAATGG TCAGCAAGTG
CTGATGGTGC ATGGCGGCGG CTGTTTGGTC GACGAGCAAT TAGCCGCAAA CGGCATGGAA
ACCGTCAAGC TAGAAGGCTT GCGGGTCACT CCGCCGGAGC AAATGCCGAT TATTGCCGGT
GCACTGGCTG GAACATCAAA TAAGATCCTC CAAGGCGCAG CGACTAAAGC CGGGATTGTG
AGCATTGGCA TGAGCTTAGC CGATGGCAAC ACAGTATCGG CCAAGATCAA AGATGAGCGT
TTAGGGTTAG TGGGCGAGGT TTCTCCTAAA GACGCCACCT ACCTCAAGTT TATTCTGTCC
CAAGGTTGGA TGCCGATTTG TAGCTCGATT GCCATGATGG ACGATGGCCA AATGCTGAAC
GTGAACGCCG ACCAAGCGGC GACGGTATTA GCTAAGTTAG TCGGTGGCAA GTTGGTGCTG
CTATCGGATG TATCTGGCGT GCTCGATGGT AAAGGTCAAT TAATCCCTTC GCTGAATGGT
AAGCAGATTG CGGATTTGGT GAAGCAAGGC GTGATCGAAA AGGGAATGAA GGTAAAAGTA
GAAGCTGCGC TCGAAGTGGC GCAGTGGATG GGGCAGGCGG TTCAAGTTGC CTCATGGCGT
GATGCAAGCC AATTAGTCGC ATTAGCAAAA GGTGAGGCCG TGGGCACACA AATCCAACCA
TAA
 
Protein sequence
MSTNNSVLVL KVGGALLQCE MGMARLMDTA AAMIANGQQV LMVHGGGCLV DEQLAANGME 
TVKLEGLRVT PPEQMPIIAG ALAGTSNKIL QGAATKAGIV SIGMSLADGN TVSAKIKDER
LGLVGEVSPK DATYLKFILS QGWMPICSSI AMMDDGQMLN VNADQAATVL AKLVGGKLVL
LSDVSGVLDG KGQLIPSLNG KQIADLVKQG VIEKGMKVKV EAALEVAQWM GQAVQVASWR
DASQLVALAK GEAVGTQIQP