Gene Shewana3_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3902 
Symbol 
ID4480113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4682547 
End bp4683770 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content50% 
IMG OID639728515 
Productargininosuccinate synthase 
Protein accessionYP_871526 
Protein GI117922334 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.940793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.44318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG AGAACAAAAA CACTGGCGTG AAAAAAGTCG TTTTAGCCTA TTCGGGTGGT 
CTAGATACTT CGGCCATTAT TCCTTGGTTA AAAGAAACCT ACGACAACTG TGAAATCATC
GCCTTTTGCG CTGACGTAGG TCAGGGTGAA GAAGAGTTAG TGGGTCTAAC TGAAAAGGCA
TTAGCTTCTG GCGCATCTGA ATGCCATATC GTCGATCTGA AAGAAGAATT CGTTAAAGAC
TATATCTACC CAACCATGGC AACGGGTGCG ATCTACGAAG GGACTTACCT GTTAGGTACT
TCAATGGCGC GTCCAATCAT TGCTAAGGCG CAGGTTGAAG TGGCACGTAA AGTGGGTGCC
GATGCCCTGT GTCACGGTTG TACCGGTAAG GGTAACGACC AAGTGCGTTT CGAAGGTTGC
TTTGCGGCAT TAGCACCTGA TTTAAAAGTG ATTGCACCAT GGCGTGAATG GACCATGCAG
AGCCGTGAAG ATCTGCTGGC TTACTTAGCC GAGCGTAATA TCAAGACGTC GGCTTCTGCC
ACTAAGATCT ACAGCCGTGA TGCCAACGCA TTCCACATTT CCCACGAAGG TGGCGAGCTG
GAAGATCCAT GGAACGAGCC AAGCAAAGGT GTATGGACAC TGACTGCCGA TCCAGAAGAT
GCGCCAAACC AAGCAGAATA TGTGTCGCTC GAAGTTGAAC ATGGCCGTGT GACTAAAGTA
AACGGTGAGG CATTAACACC TTACGCTGCA CTGATGAAGC TGAACGCGAT CGCTGCACCA
CATGGCGTGG GTCGTATCGA TATCACCGAA AACCGTTTAG TGGGCATGAA GTCTCGTGGT
TGCTACGAAA CTCCAGGCGG CACTGTGATG TTTGCTGCGC TGCGCGCGAT TGAAGAGTTA
GTGCTGGATA AAACCAGCCG TACTTGGCGC GAGCAAGTGG GCGCCCAAAT GGCACACTTA
GTCTACGATG GTCGTTGGTT TACACCTCTG TGTAAGTCGC TGTTGGCGGC ATCTGAGTCA
TTAGCCGAGT CTGTTAACGG TGAAGTTGTG GTTAAACTCT ACAAAGGTCA CGCGATTGCC
GTTAAGAAGC GTTCGCCAAA CAGCTTGTAC TCTGAAGCCT TTGCCACCTT CGGTGAAGAC
CAAGTGTACG ACCAAAAACA CGCTGAAGGC TTTATCCGTC TGTACTCGTT AGCAAGCCGC
ATCCGCGCGC TCAACGCTAA GTAA
 
Protein sequence
MSIENKNTGV KKVVLAYSGG LDTSAIIPWL KETYDNCEII AFCADVGQGE EELVGLTEKA 
LASGASECHI VDLKEEFVKD YIYPTMATGA IYEGTYLLGT SMARPIIAKA QVEVARKVGA
DALCHGCTGK GNDQVRFEGC FAALAPDLKV IAPWREWTMQ SREDLLAYLA ERNIKTSASA
TKIYSRDANA FHISHEGGEL EDPWNEPSKG VWTLTADPED APNQAEYVSL EVEHGRVTKV
NGEALTPYAA LMKLNAIAAP HGVGRIDITE NRLVGMKSRG CYETPGGTVM FAALRAIEEL
VLDKTSRTWR EQVGAQMAHL VYDGRWFTPL CKSLLAASES LAESVNGEVV VKLYKGHAIA
VKKRSPNSLY SEAFATFGED QVYDQKHAEG FIRLYSLASR IRALNAK