| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3898 |
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| Symbol | |
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| ID | 4480109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4676660 |
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| End bp | 4677244 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639728511 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_871522 |
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| Protein GI | 117922330 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0126413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.209568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA TAAACCTGCT TCCTTGGCGT GAAGAAGCGA GAGAAAAGCA GAAGCGCGAT
TATATTGGCA TATTGGCCGC GGTATTTTTA GGCTCAGCGA TTTTAGTCTA TGTGGCTCTA
TCTTTACTCG ACATGATGAC CGATGAACAG CGCGGACGTA ATGCTTACTT GCAGTCTGAA
ATTCAGCAAC TCGATGCACA AATCGCCGAG ATTAAAAAGA TCACCGAGCG TAAGAAAGAT
ATTGAGCGTC GCACCGAGAT TATTTTGAAC CTTCAGCAAT CCCGTAATTT GCCGACACAC
GTATTAGATG AGCTGGTGCG TATCGTGCCG CCCGGAATAT ATCTATCTAG CTTAGAGAAA
AAAGGCAGTT TATTACTGAT TGAAGGCCGC AGTGAATCGA ACAACAACGT GGCGAACATG
ATGCGTAAGG TGAAGGCGTC CGAGTGGTTA ACCGATCCCA ATATGCAATC TATCGTGTCT
CAAGATGATG AGCTAAGACA ATTACAACGC TTTAGCTTAA GAGTGAGCAT TAAAGGTGCC
ATGGCTGATG AGCCTATTAA AACGGCAAAA GGAGCGAGTA AATGA
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| Protein sequence | MANINLLPWR EEAREKQKRD YIGILAAVFL GSAILVYVAL SLLDMMTDEQ RGRNAYLQSE
IQQLDAQIAE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK
KGSLLLIEGR SESNNNVANM MRKVKASEWL TDPNMQSIVS QDDELRQLQR FSLRVSIKGA
MADEPIKTAK GASK
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