| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3897 |
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| Symbol | |
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| ID | 4480108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4676037 |
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| End bp | 4676663 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639728510 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_871521 |
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| Protein GI | 117922329 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000635484 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.218111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ATCTAAGTCA GTTTAATGAT ATCGATTTTG AGAACATCGG CGGTTGGCCG
AATCAAGTCA AAGTGTTTTT CGCTGTGCTA TTGGCACTCT GCGTATTTGC CGCGGGGTAT
TTCCTCGTGG TTTCGGATGC TATCGATGTG TATAACGCGG AGCAACGAAA AGAAGAACAG
CTCAGAGAAG ATTTTAAAAC TAAATATCAG CTTGCCGCTA ACCTTAAATT GTACCGTGAA
CAGTTAGCTG TGATGGAGGA GCAATTTGCC GAGTTACTCA AAATGCTGCC CTCTGAAAAT
GAAATGCCAG GGCTGCTCGA TGACTTAACC TTTGTGGCCA CTGACGCCGG ATTACGGATT
AATAGCTTAA ATTGGGAACC TGAGATTCAA CGGGATTTCT ATATTGAGTT CCCGATTAAA
ATGTCGGTCA CAGGCGATTA TCACCAAATA GGCAATATGG TTAGCGGCGT GGCTAAACTG
CCTCGTATCG TCAGCTTGCA CGATTTTACG ATTAAGCGCG ACGAGAGCGG TAATCTGGCC
ATGGATATTC TGGCGAAAAC CTATCGCTTT AAAGAGGGCG CTGAATTACC TCCCGAAAAT
GCAGCCAATA ACAAGGGGAA GAAATAA
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| Protein sequence | MKLDLSQFND IDFENIGGWP NQVKVFFAVL LALCVFAAGY FLVVSDAIDV YNAEQRKEEQ
LREDFKTKYQ LAANLKLYRE QLAVMEEQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI
NSLNWEPEIQ RDFYIEFPIK MSVTGDYHQI GNMVSGVAKL PRIVSLHDFT IKRDESGNLA
MDILAKTYRF KEGAELPPEN AANNKGKK
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