| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3896 |
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| Symbol | |
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| ID | 4480107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4675522 |
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| End bp | 4676037 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639728509 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_871520 |
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| Protein GI | 117922328 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00151123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.208053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TACCTCTGTT AGCATTAAGT CTTTTTTTAA TGGGTTGTGT TGGCGATCGT
AGTGATTTAG AGCTATTTGT TACTACTACC AAGGCACAGC ATGTGGCGCA TATTCCACCC
TTAAAAGAGC CACCTAAGTT TGAGCATTTT GCGTATCAAG CCGAATTAAT GCGTAGCCCC
TTTGTCCCTC CTTCTCGAGA GTTAACGGAA GAAGTGGTTG ATACTAGCAA AAACTGCTTA
CAGCCGGATT TGAAACGCCG TAAAGGCCGT TTAGAAACCT ATGCATTAGA CAATCTAAAA
ATGCGCGGTA CTTTAAGTGA AGGTAATTCG ATTTGGGCGC TTATTGAAAC CAATGATGGC
AGTGTATATC GGATGGGCGT AGGTGAGTAT CTTGGATTGT TTAATGGCCA TATAGCGAAA
GTGACTTCTC AGAATGTGGA AGTTGTAGAA TTAATTCCCG ATGGTTCTGG TTGTTGGTCT
GAACGCACAA ACAACATTGA ACTTTCTGGA AAATAA
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| Protein sequence | MKLLPLLALS LFLMGCVGDR SDLELFVTTT KAQHVAHIPP LKEPPKFEHF AYQAELMRSP
FVPPSRELTE EVVDTSKNCL QPDLKRRKGR LETYALDNLK MRGTLSEGNS IWALIETNDG
SVYRMGVGEY LGLFNGHIAK VTSQNVEVVE LIPDGSGCWS ERTNNIELSG K
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