| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3885 |
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| Symbol | |
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| ID | 4480096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4664825 |
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| End bp | 4665697 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728498 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_871509 |
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| Protein GI | 117922317 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.19798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC TCCCTCCATT ACGCGCACTA CAAGTCTTTG AGACCGCCGC CAGACAACAG
CATTTTTCCA AGGCTGCCGC CGAACTTTGC ATTACCCAAA GCGCGGTTTC ACACCAAGTG
CGTGTATTAG AGGAATATTT TGGCGAGCAG CTTTTCGACC GTCAGGGACG AAAATTGCAA
CTCACGCCGA AAGGCCAAAG CTTATTTATT GAGTTAGAAA GGATTTTTAA TGAGTTAAGC
GATCTTAATC TCAAGATCCG CGACACCCCA AACCAACAAC TCTGTTTGGC GGTGTACAGC
TCTTTTGCGG TGAAATGGTT GATCCCGAGA TTAGCGGATT TTAGACGCCA GTATCCCAGC
GTTAAAATTC GCCTCGAGAT GATCACTCAA GACCCCGATC TCAGCACCAG CACGGCCGAT
ATCTTTATCG CGGGCAAACT TAACCAACGG GGCTATTGGC AACAGTTATT GCATAAGGAG
CGGCTCATCC CTGTATGCAG CCCGAGTTTT TACCCCAAGT GGCGTGATAT TAACTTGAGC
AATTTCCAGC AACAGGCATT ACTGATTGTG GATGAGGGGC CGCTGGGACT CGATTGGCAC
AAATGGTCAT CGGCCCATCA GATCCCGCTG AATAACGAGC AGCAACATAT TTTTAGCCAT
ATCGTAATGG CAATTGAGGC CGCGATTGCA GGCCAAGGCC TCGCCCTCGC CCCCGATTTT
ATGGTGGCAG GTGATATCAG CACCGGCAGA CTGGTTGCGG TTAATCTGCC CGATGTCCAT
ACGGGCTTTG AGTTTAGCTT TATCTGTAAG CAGCGCCGTC TCACAGAGCC TGCCATCGCC
GCCTTTTCCT CCTGGCTGAA ATCCCAAGCC TAA
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| Protein sequence | MRKLPPLRAL QVFETAARQQ HFSKAAAELC ITQSAVSHQV RVLEEYFGEQ LFDRQGRKLQ
LTPKGQSLFI ELERIFNELS DLNLKIRDTP NQQLCLAVYS SFAVKWLIPR LADFRRQYPS
VKIRLEMITQ DPDLSTSTAD IFIAGKLNQR GYWQQLLHKE RLIPVCSPSF YPKWRDINLS
NFQQQALLIV DEGPLGLDWH KWSSAHQIPL NNEQQHIFSH IVMAIEAAIA GQGLALAPDF
MVAGDISTGR LVAVNLPDVH TGFEFSFICK QRRLTEPAIA AFSSWLKSQA
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