Gene Shewana3_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3882 
Symbol 
ID4480093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4662609 
End bp4663202 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content52% 
IMG OID639728495 
Productphosphoheptose isomerase 
Protein accessionYP_871506 
Protein GI117922314 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.118064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAC GCATTAAAGA CAGCTTTACT GAATCTATCC AGACCAAAAT CGATGCAGCC 
GAAGCACTGC CAGAATCCAT CGCCAAAGCG GCCGAGATGA TGGTGCAATG TCTTTTGGGC
GGCAATAAAA TTCTTGCCTG CGGTAACGGT GGCAGTGCCG GTGATGCCCA GCACTTCTCG
GCCGAGCTAT TAAACCGCTA CGAAATTGAA CGTCCACCAT TGCCCGCGAT TGCGCTGTCA
ACCGACACTT CAACTATCAC GGCGATTGCC AACGACTACA GCTATGATGA GATTTTCTCA
AAACAAATCT TAGCCTTAGG TCAACCTGGT GACATTCTGC TGGCGATTTC CACCAGCGGT
AACTCAGGCA ACGTGATTAA AGCCATGGAA GCCGCCCTGA GCCGCGATAT GACTATCGTT
GCCTTAACCG GTAAAGACGG TGGCGCGATG GCGGGATTAC TGAGCGTGGG CGACGTGGAA
ATCCGCGTAC CTTCTAACGT GACGGCACGC ATTCAAGAAG TGCACTTACT GGTTATCCAC
TGCCTCTGTG ACAATATCGA CCGCACGCTC TTCCCGCAGG ACGAACAGCA ATGA
 
Protein sequence
MLERIKDSFT ESIQTKIDAA EALPESIAKA AEMMVQCLLG GNKILACGNG GSAGDAQHFS 
AELLNRYEIE RPPLPAIALS TDTSTITAIA NDYSYDEIFS KQILALGQPG DILLAISTSG
NSGNVIKAME AALSRDMTIV ALTGKDGGAM AGLLSVGDVE IRVPSNVTAR IQEVHLLVIH
CLCDNIDRTL FPQDEQQ