Gene Shewana3_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3879 
Symbol 
ID4480090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4659362 
End bp4660207 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID639728492 
Producthypothetical protein 
Protein accessionYP_871503 
Protein GI117922311 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.071503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GCGTCGCACT CTACATTGTT CCCACTCCCA TTGGTAACCT GGGGGACATG 
AGCCCACGTG CTATCGAAGT GCTCACTCAG GTCGCATTGA TTGCCTGTGA AGATACGCGC
CATAGTGGCA AGTTATTGAG TCATTTCGGT ATTTCTACCC AAACGATCGC ACTGCATGAC
CATAATGAGC GCGCCCGCGC CCAATGGATT GTGGAGCAGT TAGCCGCAGG GCAATCGATT
GCGCTGATTT CCGATGCAGG TACACCGCTG ATTTCTGACC CCGGCTATCA CTTAGTCTCC
CATGTGCGCC AGTCGGGTTT TAGCGTGATC CCATTGCCCG GCCCTTGCGC GGCGATTACC
GCATTAAGCG CGTCGGGTTT ACCATCGGAT CGTTTCTCCT TCGAGGGCTT CTTACCTTCT
AAAGAGAAGG CGCGTGCCGA TAAGCTGCTC GAGCTTAAGG AAGACTCTCG CACGCTGATT
TTTTATGAAT CACCGCACCG CATCGAACAC AGTTTAACGA CCATGGTCGA AGTGTTAGGC
GGCGAGCGGC AAGTGGTGAT GGCGCGGGAA GTCACTAAAA CCTTCGAGAC CTTCCTCTCA
GGCCCTGTGG CCGAGGTGCT GGCTACGGTC AGCAGCGATC CTTACCAGCA AAAAGGCGAG
ATAGTGCTGA TGGTACATGG TCATCGCGCT GCGGAGGATG ATGACGCCAT TCCGACTGTC
GCCATCAACA CCTTGAAATT ACTCTGTGAA GAATTGCCCC TCAAAAAGGC CGCCGCCATT
GCCGCGCAAA TTCACGGCCT TAAAAAGAAT GCCCTGTATA AGTTCGGTTT AGAGTCGGAT
TTATAA
 
Protein sequence
MDQSVALYIV PTPIGNLGDM SPRAIEVLTQ VALIACEDTR HSGKLLSHFG ISTQTIALHD 
HNERARAQWI VEQLAAGQSI ALISDAGTPL ISDPGYHLVS HVRQSGFSVI PLPGPCAAIT
ALSASGLPSD RFSFEGFLPS KEKARADKLL ELKEDSRTLI FYESPHRIEH SLTTMVEVLG
GERQVVMARE VTKTFETFLS GPVAEVLATV SSDPYQQKGE IVLMVHGHRA AEDDDAIPTV
AINTLKLLCE ELPLKKAAAI AAQIHGLKKN ALYKFGLESD L