Gene Shewana3_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3876 
Symbol 
ID4480086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4655144 
End bp4656364 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content52% 
IMG OID639728489 
Producthypothetical protein 
Protein accessionYP_871500 
Protein GI117922308 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0425412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA 
CATAAGTTTG GCACACCCGC TTACCGTCTT GAAACCCATT TGCAAACCGT CTCACGGACG
CTCGGAATCG AAGGTTATTT TTTAATCTCG CCGACCTCCA TGACCTTCGT ATTACAACAC
GATACCGATC AAGAATATAA CCATGTTGCG CGGGTTAAAC CCGGCGAATT GGATTTAGGC
TCCCTCGCTC GCACCGATGA ACTGGTAGAT GAGCTCACCT CGGGTAAACG CACGCTCACT
GAAGCCTTAG ACAGGCTAGA GGAAATCGCC AATAAACCCA ACCCCTACGG CCCAGCATTA
ACCTGTTTCT CCTTTGGCAC CTCGGCGGCC GCCTTTGCCA TGTTGATGGG CACGGGTTGG
AACGATGTCT TTTGGTCAGG CTTGTTAGGC TTGCTGGTCT ATGGCTTTGT GTACCGCGCC
GAGCGCTCGA CGCGCATGGC AGAAGTCTTA GAGCCCTTTG CGACGATTGT TTGCGCCATT
GCCGCCTGCG CCATTGCCCG TATCGACCCT AATATTAATA TTCCCGTGGT GATCCTCTCC
TCCATCATCA TCTTTATTCC CGGCTTAGCC CTAACCTTAG GGCTGGCGGA ACTGGCGGCA
CGCGACCTGA TCTCGGGCAC AGCACGGATC ATGGACGCCA GTATGTTGTT GTTTAAGTTG
TACTTTGGCG CAGTGCTGGG GATGGCGATA GGTAAAGCCT TCTTCGGTGA AGCCATTCAT
ATCGAGCCTG AGGGATTACC GCGCTGGGCA ATTTGGTCGG CGGTGCCGAT TCTCTCGATG
GCGCTGGTGT TTATCTTTAA GGCACGGATG CAAGATTCGC CCTGGGGCGT ACTGGCGGGG
ATAGTGGCAT TCTTCTCCGC CATGTTAGGC GGGCACTTTT TTGGGGATTC TGTGGGGATC
TTCTTCGGCG CCTTGGCGGT TGGGGTGTAT TCCAATCTCT TCGCCCGTTG GATGAAGGCG
CCCGCCTCGA TTGCACTGCT GCAAGGTATT GTTATTTTAG TGCCCGGCAG TAAAACCTAC
ATAGGGCTGA ACGCGCTGAT CTCCGGCGAA ACTATGCTTA ACCAATCCCA TATTGGATCG
CAGATCTTTT TGATCTTTAT GTCGCTTATC GCTGGACTGA TTTTTGCCAA CGTCGTGGTA
CCGCCAAGAC GTACGCTGTA A
 
Protein sequence
MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH 
DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPAL
TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSTRMAEVL EPFATIVCAI
AACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL
YFGAVLGMAI GKAFFGEAIH IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG
IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY
IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL