Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3876 |
Symbol | |
ID | 4480086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4655144 |
End bp | 4656364 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728489 |
Product | hypothetical protein |
Protein accession | YP_871500 |
Protein GI | 117922308 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0425412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA CATAAGTTTG GCACACCCGC TTACCGTCTT GAAACCCATT TGCAAACCGT CTCACGGACG CTCGGAATCG AAGGTTATTT TTTAATCTCG CCGACCTCCA TGACCTTCGT ATTACAACAC GATACCGATC AAGAATATAA CCATGTTGCG CGGGTTAAAC CCGGCGAATT GGATTTAGGC TCCCTCGCTC GCACCGATGA ACTGGTAGAT GAGCTCACCT CGGGTAAACG CACGCTCACT GAAGCCTTAG ACAGGCTAGA GGAAATCGCC AATAAACCCA ACCCCTACGG CCCAGCATTA ACCTGTTTCT CCTTTGGCAC CTCGGCGGCC GCCTTTGCCA TGTTGATGGG CACGGGTTGG AACGATGTCT TTTGGTCAGG CTTGTTAGGC TTGCTGGTCT ATGGCTTTGT GTACCGCGCC GAGCGCTCGA CGCGCATGGC AGAAGTCTTA GAGCCCTTTG CGACGATTGT TTGCGCCATT GCCGCCTGCG CCATTGCCCG TATCGACCCT AATATTAATA TTCCCGTGGT GATCCTCTCC TCCATCATCA TCTTTATTCC CGGCTTAGCC CTAACCTTAG GGCTGGCGGA ACTGGCGGCA CGCGACCTGA TCTCGGGCAC AGCACGGATC ATGGACGCCA GTATGTTGTT GTTTAAGTTG TACTTTGGCG CAGTGCTGGG GATGGCGATA GGTAAAGCCT TCTTCGGTGA AGCCATTCAT ATCGAGCCTG AGGGATTACC GCGCTGGGCA ATTTGGTCGG CGGTGCCGAT TCTCTCGATG GCGCTGGTGT TTATCTTTAA GGCACGGATG CAAGATTCGC CCTGGGGCGT ACTGGCGGGG ATAGTGGCAT TCTTCTCCGC CATGTTAGGC GGGCACTTTT TTGGGGATTC TGTGGGGATC TTCTTCGGCG CCTTGGCGGT TGGGGTGTAT TCCAATCTCT TCGCCCGTTG GATGAAGGCG CCCGCCTCGA TTGCACTGCT GCAAGGTATT GTTATTTTAG TGCCCGGCAG TAAAACCTAC ATAGGGCTGA ACGCGCTGAT CTCCGGCGAA ACTATGCTTA ACCAATCCCA TATTGGATCG CAGATCTTTT TGATCTTTAT GTCGCTTATC GCTGGACTGA TTTTTGCCAA CGTCGTGGTA CCGCCAAGAC GTACGCTGTA A
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Protein sequence | MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPAL TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSTRMAEVL EPFATIVCAI AACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL YFGAVLGMAI GKAFFGEAIH IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL
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