Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3874 |
Symbol | |
ID | 4480084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4652032 |
End bp | 4654377 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728487 |
Product | hypothetical protein |
Protein accession | YP_871498 |
Protein GI | 117922306 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0959799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTG AATCCACACT GTTTAGCCAT CCCAAGTATT GGGCCGAGTC CTTCGGCACA GCGCCTTTCT TACCTATGTC TCGTAAGGAG ATGGAGAAAT TAGGCTGGGA CAGCTGTGAC ATTATTATTG TCACTGGTGA CGCCTATGTG GACCATCCCA GCTTTGGTAT GGCGGTCATT GGCCGGATGT TAGAAGCCCA AGGCTACCGC GTCGGGATTA TTTCTCAGCC CGATTGGTCA AGCAAAGATG CCTTTATGCA GCTTGGTCGC CCGAATCTGT TTTTTGGTGT CACCGCCGGC AACATGGATT CGATGATCAA CCGTTACACC GCCGACCGTC GTATCCGCAG CGATGATGCT TATACTCCTG GCGATGTGGG TGGTAAGCGC CCTGACCGTG CTGTGACCGT TTATACCCAA CGTTGTAAAG AAGCCTTTAA AGATGTGCCA GTAATTATTG GCGGCATCGA GGCGAGCCTG CGCCGTATTG CGCACTACGA TTATTGGTCG GATAAAGTCC GTCGCAGCGT GATTTTCGAT GCCAAGGCCG ACATCTTGAT GTACGGCAAC GCCGAGCGTC CGCTGGCCGA AGTGGCGCGT CGTTTAGCGG CGGGTGAAGC CATTGGGGAT ATTCAGGATG TGCGCGGCAC TGCCGTTATC CGTAAAGAGC CTATGCCCGA GTGGCGTGGG ATGGATTCTC GCAAGATAGA TCAACTGCAT AAGATCGATC CGATCCCGAA CCCCTATGGC GCCGACGATG TGGGCTGTGC CAATTTATCA GGCCCATCGG ATGTTAAAAT TTTCGATAAC GATGCGCCAA AACCCATCAG TGTGCAGCCA CCACGCCCTA AGCCTTGGGA TAAAACCTAT GTGCTGCTGC CAGCCTTTGA AAAGGTCTCT GAGGACAAAT ACTTATACGC CCATGCTTCG CGGATTTTGC ACCAAGAGCA AAACCCGGGT TGTGCGCGAG CGTTGTTCCA GCCCCATGGT GACCGTGGTG TGTGGGTGAA CCCTCCGGCT TGGCCACTCA ATACCGACGA GATGGATGCC GTGTTCGATT TACCCTATAA AAGGGTGCCG CATCCTGCCT ACGGTAAGGA CAAAATCCCC GCCTATGACA TGATCAAAAC CTCGATCAAC ATCATGCGCG GTTGCTTTGG TGGCTGTTCA TTCTGCTCGA TTACCGAGCA TGAAGGCCGG ATTATCCAGA GCCGTTCGCA AGAATCAATT ATCAAAGAAA TCAAAGATAT TCAGGATAAG GTTCCCGGTT TTACTGGGGT GATTTCCGAC TTAGGCGGCC CCACCGCCAA CATGTATCGC CTCGGCTGTA CCAGCGAAAA AGCGGAGAAA ACCTGTCGCC GTTTATCTTG TGTGTATCCA TCAATTTGCG GCCATTTAGG CACAGATCAT AAACATACTA TCGACTTGTA CCGCGCCGCT CGCGCCGTGC CCGGCATTAA GAAAATCTTG ATTGCTTCGG GCGTGCGTTA TGACTTAGCG ATTGAAGATC CGGCCTATGT CAAAGAGTTG GTCCAGCACC ATGTGGGCGG CTATTTGAAA ATCGCCCCTG AGCATACCGA AGAAGGGCCG CTCAGCAAGA TGATGAAACC CGGCATGGGC GCCTACGATA AGTTTAAAGA GCTGTTCGAC AAGTATTCTA AGGAAGCGGG CAAAGAACAG TTCCTGATCC CTTATTTTAT TTCGGCGCAT CCGGGCACGA CCGATGAGGA TATGCTTAAC CTCGCGCTCT GGTTGAAGGA GCGTAAGTTT AAGCTCGACC AAGTGCAAAA CTTCTATCCA TCGCCAATGG CAAACGCGAC GACCATTTAT CACACTGAGT TGAACTCGTT GAAAAACGTC AAGCACACCA GCGAAGTGGT GCCTGTGCCG AAGAAGGGCC GCCAACGCCG CCTGCATAAG GCGCTGCTGC GTTACCATGA TCCAGCGGGT TGGCCTATCA TCCGCGAAGG TTTGATTGCC ATGGGACGTG AAGATTTGAT TGGCAACAGT CCGAATCACC TCGTTCCACC AGAAGGGCGC AACGAACGTG GTCAGAAATG GATGAAGGAT GCTAACCAAG GGCAAAAAGC CCTGACGCGT TTCTCGGGCA ATCAGTTCGA TGAGCGTAAG GGTAAAGGCG ATGCCAAGGG CAAACCGAGC GCAAGCAAGC CTAAGGGACC CAAGTCTGGG GCGAATGCAA CGCAAAGTCA GCAGCCTAAG AGCAGCCGTC CGGGCGCTAA GGCGCCTTTT GGTCAGTCGG GCTTTAAGGG AAAATCTGAG CAGGGTAAAG CTGGTCACCA AGGCCGCGGA AACAAAGCCT CTTCAGGCCG TCAGCACGCC AAGTAA
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Protein sequence | MQVESTLFSH PKYWAESFGT APFLPMSRKE MEKLGWDSCD IIIVTGDAYV DHPSFGMAVI GRMLEAQGYR VGIISQPDWS SKDAFMQLGR PNLFFGVTAG NMDSMINRYT ADRRIRSDDA YTPGDVGGKR PDRAVTVYTQ RCKEAFKDVP VIIGGIEASL RRIAHYDYWS DKVRRSVIFD AKADILMYGN AERPLAEVAR RLAAGEAIGD IQDVRGTAVI RKEPMPEWRG MDSRKIDQLH KIDPIPNPYG ADDVGCANLS GPSDVKIFDN DAPKPISVQP PRPKPWDKTY VLLPAFEKVS EDKYLYAHAS RILHQEQNPG CARALFQPHG DRGVWVNPPA WPLNTDEMDA VFDLPYKRVP HPAYGKDKIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI IKEIKDIQDK VPGFTGVISD LGGPTANMYR LGCTSEKAEK TCRRLSCVYP SICGHLGTDH KHTIDLYRAA RAVPGIKKIL IASGVRYDLA IEDPAYVKEL VQHHVGGYLK IAPEHTEEGP LSKMMKPGMG AYDKFKELFD KYSKEAGKEQ FLIPYFISAH PGTTDEDMLN LALWLKERKF KLDQVQNFYP SPMANATTIY HTELNSLKNV KHTSEVVPVP KKGRQRRLHK ALLRYHDPAG WPIIREGLIA MGREDLIGNS PNHLVPPEGR NERGQKWMKD ANQGQKALTR FSGNQFDERK GKGDAKGKPS ASKPKGPKSG ANATQSQQPK SSRPGAKAPF GQSGFKGKSE QGKAGHQGRG NKASSGRQHA K
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