Gene Shewana3_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3874 
Symbol 
ID4480084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4652032 
End bp4654377 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content53% 
IMG OID639728487 
Producthypothetical protein 
Protein accessionYP_871498 
Protein GI117922306 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0959799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTG AATCCACACT GTTTAGCCAT CCCAAGTATT GGGCCGAGTC CTTCGGCACA 
GCGCCTTTCT TACCTATGTC TCGTAAGGAG ATGGAGAAAT TAGGCTGGGA CAGCTGTGAC
ATTATTATTG TCACTGGTGA CGCCTATGTG GACCATCCCA GCTTTGGTAT GGCGGTCATT
GGCCGGATGT TAGAAGCCCA AGGCTACCGC GTCGGGATTA TTTCTCAGCC CGATTGGTCA
AGCAAAGATG CCTTTATGCA GCTTGGTCGC CCGAATCTGT TTTTTGGTGT CACCGCCGGC
AACATGGATT CGATGATCAA CCGTTACACC GCCGACCGTC GTATCCGCAG CGATGATGCT
TATACTCCTG GCGATGTGGG TGGTAAGCGC CCTGACCGTG CTGTGACCGT TTATACCCAA
CGTTGTAAAG AAGCCTTTAA AGATGTGCCA GTAATTATTG GCGGCATCGA GGCGAGCCTG
CGCCGTATTG CGCACTACGA TTATTGGTCG GATAAAGTCC GTCGCAGCGT GATTTTCGAT
GCCAAGGCCG ACATCTTGAT GTACGGCAAC GCCGAGCGTC CGCTGGCCGA AGTGGCGCGT
CGTTTAGCGG CGGGTGAAGC CATTGGGGAT ATTCAGGATG TGCGCGGCAC TGCCGTTATC
CGTAAAGAGC CTATGCCCGA GTGGCGTGGG ATGGATTCTC GCAAGATAGA TCAACTGCAT
AAGATCGATC CGATCCCGAA CCCCTATGGC GCCGACGATG TGGGCTGTGC CAATTTATCA
GGCCCATCGG ATGTTAAAAT TTTCGATAAC GATGCGCCAA AACCCATCAG TGTGCAGCCA
CCACGCCCTA AGCCTTGGGA TAAAACCTAT GTGCTGCTGC CAGCCTTTGA AAAGGTCTCT
GAGGACAAAT ACTTATACGC CCATGCTTCG CGGATTTTGC ACCAAGAGCA AAACCCGGGT
TGTGCGCGAG CGTTGTTCCA GCCCCATGGT GACCGTGGTG TGTGGGTGAA CCCTCCGGCT
TGGCCACTCA ATACCGACGA GATGGATGCC GTGTTCGATT TACCCTATAA AAGGGTGCCG
CATCCTGCCT ACGGTAAGGA CAAAATCCCC GCCTATGACA TGATCAAAAC CTCGATCAAC
ATCATGCGCG GTTGCTTTGG TGGCTGTTCA TTCTGCTCGA TTACCGAGCA TGAAGGCCGG
ATTATCCAGA GCCGTTCGCA AGAATCAATT ATCAAAGAAA TCAAAGATAT TCAGGATAAG
GTTCCCGGTT TTACTGGGGT GATTTCCGAC TTAGGCGGCC CCACCGCCAA CATGTATCGC
CTCGGCTGTA CCAGCGAAAA AGCGGAGAAA ACCTGTCGCC GTTTATCTTG TGTGTATCCA
TCAATTTGCG GCCATTTAGG CACAGATCAT AAACATACTA TCGACTTGTA CCGCGCCGCT
CGCGCCGTGC CCGGCATTAA GAAAATCTTG ATTGCTTCGG GCGTGCGTTA TGACTTAGCG
ATTGAAGATC CGGCCTATGT CAAAGAGTTG GTCCAGCACC ATGTGGGCGG CTATTTGAAA
ATCGCCCCTG AGCATACCGA AGAAGGGCCG CTCAGCAAGA TGATGAAACC CGGCATGGGC
GCCTACGATA AGTTTAAAGA GCTGTTCGAC AAGTATTCTA AGGAAGCGGG CAAAGAACAG
TTCCTGATCC CTTATTTTAT TTCGGCGCAT CCGGGCACGA CCGATGAGGA TATGCTTAAC
CTCGCGCTCT GGTTGAAGGA GCGTAAGTTT AAGCTCGACC AAGTGCAAAA CTTCTATCCA
TCGCCAATGG CAAACGCGAC GACCATTTAT CACACTGAGT TGAACTCGTT GAAAAACGTC
AAGCACACCA GCGAAGTGGT GCCTGTGCCG AAGAAGGGCC GCCAACGCCG CCTGCATAAG
GCGCTGCTGC GTTACCATGA TCCAGCGGGT TGGCCTATCA TCCGCGAAGG TTTGATTGCC
ATGGGACGTG AAGATTTGAT TGGCAACAGT CCGAATCACC TCGTTCCACC AGAAGGGCGC
AACGAACGTG GTCAGAAATG GATGAAGGAT GCTAACCAAG GGCAAAAAGC CCTGACGCGT
TTCTCGGGCA ATCAGTTCGA TGAGCGTAAG GGTAAAGGCG ATGCCAAGGG CAAACCGAGC
GCAAGCAAGC CTAAGGGACC CAAGTCTGGG GCGAATGCAA CGCAAAGTCA GCAGCCTAAG
AGCAGCCGTC CGGGCGCTAA GGCGCCTTTT GGTCAGTCGG GCTTTAAGGG AAAATCTGAG
CAGGGTAAAG CTGGTCACCA AGGCCGCGGA AACAAAGCCT CTTCAGGCCG TCAGCACGCC
AAGTAA
 
Protein sequence
MQVESTLFSH PKYWAESFGT APFLPMSRKE MEKLGWDSCD IIIVTGDAYV DHPSFGMAVI 
GRMLEAQGYR VGIISQPDWS SKDAFMQLGR PNLFFGVTAG NMDSMINRYT ADRRIRSDDA
YTPGDVGGKR PDRAVTVYTQ RCKEAFKDVP VIIGGIEASL RRIAHYDYWS DKVRRSVIFD
AKADILMYGN AERPLAEVAR RLAAGEAIGD IQDVRGTAVI RKEPMPEWRG MDSRKIDQLH
KIDPIPNPYG ADDVGCANLS GPSDVKIFDN DAPKPISVQP PRPKPWDKTY VLLPAFEKVS
EDKYLYAHAS RILHQEQNPG CARALFQPHG DRGVWVNPPA WPLNTDEMDA VFDLPYKRVP
HPAYGKDKIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI IKEIKDIQDK
VPGFTGVISD LGGPTANMYR LGCTSEKAEK TCRRLSCVYP SICGHLGTDH KHTIDLYRAA
RAVPGIKKIL IASGVRYDLA IEDPAYVKEL VQHHVGGYLK IAPEHTEEGP LSKMMKPGMG
AYDKFKELFD KYSKEAGKEQ FLIPYFISAH PGTTDEDMLN LALWLKERKF KLDQVQNFYP
SPMANATTIY HTELNSLKNV KHTSEVVPVP KKGRQRRLHK ALLRYHDPAG WPIIREGLIA
MGREDLIGNS PNHLVPPEGR NERGQKWMKD ANQGQKALTR FSGNQFDERK GKGDAKGKPS
ASKPKGPKSG ANATQSQQPK SSRPGAKAPF GQSGFKGKSE QGKAGHQGRG NKASSGRQHA
K