Gene Shewana3_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3863 
Symbol 
ID4480073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4640244 
End bp4640873 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID639728476 
Producthypothetical protein 
Protein accessionYP_871487 
Protein GI117922295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.927156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00981642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATATAA GAAGCTTACG CAAACCATCA CCGAACAAAA ACGTATTTAA ATTCGCTAGC 
GCAAAAGTAA GCGAAACGAT AATGTGTGAA AGTTCATTGG AATTTGATGC GTGCTTTCAT
CATGAATACA ATGATTGTAT AGAGATGTTT GGTAGCCAGC CTGAAGGGTT TTATTACTAT
TTTGAGGGCA AAAGATTGCC CTATACACCT GATACGATAG TTCACTTTAT CGATGGGACG
GTAAAGTTCC ACGAATACAA ACCTTATAGT AAAACATTCG ATCCAATCTT TAGGGCTAAA
TTTCTAGCAA AGAAGGCGGC TGCTCAGTCT TTAGGTGCAG ATCTTATATT GGTTACTGAA
CGTCAAATCC GTGTAAACCC GATTCTAAAT AATCTTAAAA TTTTGCATCG ATATTCGGGA
GTTTACGGCT TGAGCGACAT TCAAGTTGAA CTGCTCAATC TTATAAAAAA AACAGGGAAA
ATTAGTGTTA ACGATGTGGC AACAAAGCAA TCATTAACAC TAGGGGAAAC CCGCTCACAT
CTGTATTCTC TTATACATAA AGGATTGATT AAGGTTAACT TAAAACAAGA TGATCTCGAT
TGTAACCCCG CGGTATGGTG CATTGAATGA
 
Protein sequence
MYIRSLRKPS PNKNVFKFAS AKVSETIMCE SSLEFDACFH HEYNDCIEMF GSQPEGFYYY 
FEGKRLPYTP DTIVHFIDGT VKFHEYKPYS KTFDPIFRAK FLAKKAAAQS LGADLILVTE
RQIRVNPILN NLKILHRYSG VYGLSDIQVE LLNLIKKTGK ISVNDVATKQ SLTLGETRSH
LYSLIHKGLI KVNLKQDDLD CNPAVWCIE