| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3861 |
|---|
| Symbol | |
|---|
| ID | 4480071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4637378 |
|---|
| End bp | 4638337 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639728474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871485 |
|---|
| Protein GI | 117922293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0197504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCTC TAGTCAAAGA CATTTTTAAT GACTTTGATG AATTAAGACT AAATAGGCTT
TTTCAATCAG ATCAGCAGTG CATGCTACTG ACTGGAGATA CTGGTGTTGG TAAAAGTCAT
CTAGTTAACC ACTATAAAAA AAGTGTTCTG GCCAGCCAAA ATTACGGACG AGAATCTATG
CCTGTTCTTG TGAGCAGGAT ATCTAGTGGT AAGGGTTTAG ATGCCACCTT AACTCAAATG
CTTGCAGATT TAGACCATTT TGGTAGCTAC CAGCGAAGGA AACGTGGTTA TGCGACAGAT
TTAAGGAAAA AGTTAGTTGA AAATTTAACT AAGGCTCAAG TTGAGCTGCT AATCATCAAT
GAGTTTCAGG AGTTAATTGA GTTCAAAACA GGATTGGAAC GGCAAGATAT AGCTAACGGT
TTAAAGTACA TCAGCGAAGA AGCTAAGATA CCTATTGTAC TTGTTGGAAT GCCTTGGGCC
GAACAAATCG CTGATGAGCC ACAATGGTCA TCTCGTTTAG TTCGAAGAAG GAAGCTTGAG
TATTTTAGTC TGCAAAAAGA TATCAAGTTT TTCCGACAAT ACTTAATGAG CTTGGCCAAA
TTTATGCCTT TTGATAATCC GCCAAAGCTA GAAGACAAGA ATTTTGCAAT TCCGCTGTTT
GCAGCATGCA AGGGTGAAAA CAGGCTGCTA AAGCATTTAC TGATAGAGTC GTTAAAAATA
GCATTGAGGA AAGACGTAAA AAACCTCGAT ATAGAGCATG TTAGTGATGC CTATGATTTG
ATTTTTCAGA ATGAAAATAG GCCCTCAAGT AATCCGTTTA GACTGTCTTT AGATAACATA
TTGATTTCAG AGGTCGTGAA GCCCTCTAGG TATAATCCTA ATGCCATAAG TTCTGAAGAC
ATGCTAGTCG CGCGTGAATT CTCGACGCCC AAAACACTAG CTCAGCTATT GACTAAATGA
|
|---|
| Protein sequence | MHPLVKDIFN DFDELRLNRL FQSDQQCMLL TGDTGVGKSH LVNHYKKSVL ASQNYGRESM
PVLVSRISSG KGLDATLTQM LADLDHFGSY QRRKRGYATD LRKKLVENLT KAQVELLIIN
EFQELIEFKT GLERQDIANG LKYISEEAKI PIVLVGMPWA EQIADEPQWS SRLVRRRKLE
YFSLQKDIKF FRQYLMSLAK FMPFDNPPKL EDKNFAIPLF AACKGENRLL KHLLIESLKI
ALRKDVKNLD IEHVSDAYDL IFQNENRPSS NPFRLSLDNI LISEVVKPSR YNPNAISSED
MLVAREFSTP KTLAQLLTK
|
|---|
| |