Gene Shewana3_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3860 
Symbol 
ID4480070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand+ 
Start bp4636729 
End bp4637265 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID639728473 
Producthypothetical protein 
Protein accessionYP_871484 
Protein GI117922292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.577525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0161383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAATA TTCTGATGCC GAAAATGATC CGCATAAATG CAACAATACT CACCATTCTT 
ATTGTTGATG AGAAGCAGCA ACTCACTGTT ACACAAATAA AAAGTCAGAT GGTCAGAGTA 
AATCCTTCGA TTTTGCCAAG AGAGTCAGAA CAAATCGTGC GCCGTACTCT TTCAAAGCTC 
TCAAACATTG GTTTTTTAGA GAAAATAACT TCTGGGAAAC GGACTGTTTT CGAAAAAACC 
TCTTTATTTG ATATAACTCG CCTAATGCCG AGTAAACCAC GTCTTACGAA AATAGAAGTA 
TCACCAACTA AACTCCCTGA AATAGAGCAA CTCCAAGCTA CACTCCATCA ATATCAAGAA 
GGTTTTCACG GTTGTATTGG TGAGGCAGAA GAGCTTAAAC GTCTCTACGA AGCACTTCCC 
TCCTCTAAGA TTAATCTTTT CCCTCGTTAC TTAGATGCTC GAAATCGGGG CTCTACACTT 
GCGGGAAAAA TCAAAGCCAT TGAAGCCTAT TTAACTGACC TTAAAGGGCT TTCATAG
 
Protein sequence
MVNILMPKMI RINATILTIL IVDEKQQLTV TQIKSQMVRV NPSILPRESE QIVRRTLSKL 
SNIGFLEKIT SGKRTVFEKT SLFDITRLMP SKPRLTKIEV SPTKLPEIEQ LQATLHQYQE 
GFHGCIGEAE ELKRLYEALP SSKINLFPRY LDARNRGSTL AGKIKAIEAY LTDLKGLS