Gene Shewana3_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3859 
Symbol 
ID4480069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4636213 
End bp4636524 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content42% 
IMG OID639728472 
ProductXRE family transcriptional regulator 
Protein accessionYP_871483 
Protein GI117922291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0153162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATA AAATTATCAA TCCATTACCT CTCAGGCTCA AACAAGCTCG CACTGCTAAG 
GGGATTAGTC AAAAACAGCT GGGCATCCAG CTAGGTATGG AAGTGGGCAC TGCGAGTGCG
CGTATGAATC AGTACGAAAA AGGCAAGCAT ACACCTGACT ACCAGACTTT AAAGGCTATC
GCTGATGAAT TAGGCGTGCC AGTTGCTTAC TTTTTTTGTG AGTCGGAAAG CACGGCTAAA
TTGCTATGTT TACTTGAAAA AATGACAGAA GAAGAAAAGT CTAATTTGAT AGAGCAAATC
ACAAAATCAT AA
 
Protein sequence
MADKIINPLP LRLKQARTAK GISQKQLGIQ LGMEVGTASA RMNQYEKGKH TPDYQTLKAI 
ADELGVPVAY FFCESESTAK LLCLLEKMTE EEKSNLIEQI TKS