| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3855 |
|---|
| Symbol | |
|---|
| ID | 4480065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4630350 |
|---|
| End bp | 4631582 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639728468 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871479 |
|---|
| Protein GI | 117922287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0189615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTT TATTTTCCCC TAGAGCAAGA GCATTCATTG ATGAGTCGCT TGAAAGTTAT
TTGCTTCGAA TCGTTTCAGA GAACTTTTTT GATTCTTATC AGCAGCTCAG CTTGGCGATC
AGAGAAGAGC TACATGAGCT CGACTTTGAA GCACATGGGG CTTTCCCTAT CGAGCTAAAA
CGCCTCAATA TTTATCATGC TAAGCACAAT AGTCATTTTA GGATGAGGGC GTTGGGCTTA
CTTGAATCCC TTCTTGGTTT ACCTCCCCAT GAACTGGAGA AAATAGCCCT ATTTAGATCG
AACAGAGTTT TTATTGGGTC TAGCGTTGCG GTGCATCGTA ATGATATCGA TATTCCTTTA
AGTTTTATCC GTTATGCAAA TGAGGATGAT GTTGAGAGTG TGCCCGTTTG CCCTGAGTGC
TTAAAGGATG AGCCTTATAT TCGGCAAGTT TGGCATTTAA AACCATATGC TGCCTGTGCC
AAGCATGAGT GCGAATTGAT TCATCATTGC CCCGAATGCA AAGCGTCGCT CAACTATATT
GAGAATGAAT CAATTGGCTA TTGTTCCTGT GGATTTGAGC TTTCAAAAGC AGCAGTTATT
AGCGCTAAAC AGCCAGATCT CATGTTAGCG AGGAGCATTA TTGGTGGTGA TGTTACCTCT
ACAAATCCGC TTCTTCATGA AGTATGTGCA ACTCATCGGC TTGCGGCTCT ACTTTGGTAT
CAAAAGCGCT ATTGCAAAAG TAAAGAAGCT TCTTTTAGCG ATGCGGTGGA GTATTTTGAT
AACTGGCCTG AAAACTTTTA TCAAGAACTG GATCAGCTGA CGCAAGGCGC TGAATTAAGA
CTGATAAAGC TATTTAACCA CACTGCATTT CGATTTATTT ATGGTGAGTT AATTCTGCAT
TCCCGCTGTT TGTATCCAGA GGATAAAGAT CCACATTTTA TCTATGCTGC TTTAATGCGT
TATTTGCAAA GATTAGTTGA GCTACATCCT AAATCGAAAA AGCCTAACGT GGCTGATACG
CTAGTGACAG TTGCAGAAAC GACGGTTTTA CTGTCAACAA CCCAAGAGCA AGTTTATCGG
CTTCATCAAG ATGGGATATT AACGTCGGCG TTTAGGCAAA AAATAAAGCA GAGGATTGAC
CCACATGTTG GTGTTTTTTA TTTAAGGCAA GTGATCGAGT ACAAAAGCAG CTTCGGTAGT
GATAGACAGG GGATGTACTT ATCGGCATGG TAA
|
|---|
| Protein sequence | MAFLFSPRAR AFIDESLESY LLRIVSENFF DSYQQLSLAI REELHELDFE AHGAFPIELK
RLNIYHAKHN SHFRMRALGL LESLLGLPPH ELEKIALFRS NRVFIGSSVA VHRNDIDIPL
SFIRYANEDD VESVPVCPEC LKDEPYIRQV WHLKPYAACA KHECELIHHC PECKASLNYI
ENESIGYCSC GFELSKAAVI SAKQPDLMLA RSIIGGDVTS TNPLLHEVCA THRLAALLWY
QKRYCKSKEA SFSDAVEYFD NWPENFYQEL DQLTQGAELR LIKLFNHTAF RFIYGELILH
SRCLYPEDKD PHFIYAALMR YLQRLVELHP KSKKPNVADT LVTVAETTVL LSTTQEQVYR
LHQDGILTSA FRQKIKQRID PHVGVFYLRQ VIEYKSSFGS DRQGMYLSAW
|
|---|
| |