| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3828 |
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| Symbol | |
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| ID | 4480038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4597388 |
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| End bp | 4598581 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639728441 |
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| Product | methylitaconate delta2-delta3-isomerase |
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| Protein accession | YP_871452 |
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| Protein GI | 117922260 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA ATCCGTTTCC GCCCCAGATT AAAGTAGCCG CAACTTATAT GCGCGGCGGC
ACCAGTAAAG GGGTGTTTTT CCGTCTGCAA GATTTGCCCG AAGCAGCCCA AGTACCAGGC
CCTGCGCGAG ATGCGCTGCT GCTGCGCGTA ATTGGCAGCC CAGACCCCTA TGGTAAGCAG
ATTGACGGTA TGGGCGGCGC TACCTCAAGC ACCAGCAAAA CCGTGATCCT GTCTAAAAGT
ACCCAAGCCG ACCACGATGT TGACTATCTA TTCGGCCAAG TGTCTATCGA CAAACCCTTT
GTGGATTGGA GCGGAAATTG TGGCAACTTA ACCGCCGCCG TTGGTGCCTT TGCCATTAGT
AATGGCCTGA TTGATGCCGA GCGCATCCCA CAAAACGGTA TCTGCACTGT GCGTATTTGG
CAGGCCAATA TCGCTAAAAC CATTATTGCC CACGTGCCGA TTACAAATGG TGAAGTGCAG
GAAACCGGTG ATTTTGAGCT CGATGGCGTG ACCTTCCCCG CCGCTGAAGT GCAAATCGAA
TTTATGAATC CCGCCGCCGA TGAAGACGGA GACAGTGGCA GCATGTTCCC CACGGGCAAC
TTAGTGGATG TGTTAGAAGT GCCGGGCATT GGCAGCTTTA ATGCGACCAT GATTAATGCA
GGCATCCCGA CCATCTTTAT CAATGCCGAA GACTTAGGCT ACACGGGCAC TGAGCTGCAA
GACGATATCA ACAGCGATAA CGCCGCCCTT GCCAAATTTG AAACCATTCG TGCCCACGGC
GCGGTGCGTA TGGGACTTAT CAAGCATATT GATGAGGCCG CATCACGCCA ACATACGCCC
AAAGTGGCCT TTGTGGCGAA ACCCACCAGC TATGTGTCAT CGAGTGGTAA GGCTGTCGCA
GCAGAGGAAA TCGACCTGCT GGTTCGCGCC CTTTCCATGG GGAAATTACA CCATGCGATG
ATGGGCACAG CAGCCGTAGC GATTGGCACG GCTGCGGCGA TTCCCGGCAC TCTAGTCAAC
CTCGCCGCCG GCGGTGGCGA GAAGGAAGCT GTGCGCTTTG GTCACCCATC GGGCACCTTA
CGAGTGGGTG CGCAGGCCAC ATTGGAAAAT GGCGAATGGA CAGTCATCAA AGCCATTATG
AGCCGTAGCG CCCGCGTGCT AATGGAAGGC TTTGTGCGCG TACCAACGGC TTAA
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| Protein sequence | MSKNPFPPQI KVAATYMRGG TSKGVFFRLQ DLPEAAQVPG PARDALLLRV IGSPDPYGKQ
IDGMGGATSS TSKTVILSKS TQADHDVDYL FGQVSIDKPF VDWSGNCGNL TAAVGAFAIS
NGLIDAERIP QNGICTVRIW QANIAKTIIA HVPITNGEVQ ETGDFELDGV TFPAAEVQIE
FMNPAADEDG DSGSMFPTGN LVDVLEVPGI GSFNATMINA GIPTIFINAE DLGYTGTELQ
DDINSDNAAL AKFETIRAHG AVRMGLIKHI DEAASRQHTP KVAFVAKPTS YVSSSGKAVA
AEEIDLLVRA LSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGGEKEA VRFGHPSGTL
RVGAQATLEN GEWTVIKAIM SRSARVLMEG FVRVPTA
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