Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3826 |
Symbol | |
ID | 4480036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4593416 |
End bp | 4594543 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728439 |
Product | methylcitrate synthase |
Protein accession | YP_871450 |
Protein GI | 117922258 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACG CAAAAAAATT AAGTGGTGCA GGATTACGTG GCCAGAGCGC GGGTGAAACC GCATTAAGTA CCGTAGGTGT ATCGGGCAGC GGCCTGACCT ACCGCGGTTA CGATGTGAAA GATCTGGCCG AAAACGCGAC TTTTGAAGAA GTCGCCCACC TCATCCTCTA CGGTGAGTTG CCAACCACAG CACAACTCGA AGCCTATAAA ACCAAATTAA AAGGCATGCG CGGCCTGCCA CAGGCATTAA AAGAAGTGTT AGAGCGCATC CCTGCCGACG CCCACCCAAT GGATGTGATG CGTACCGGTT GTTCTATGCT GGGTAACCTC GAAGCCGAGC ACAGCTTTAG CGAGCAAAGC CAAATTGCCG ACCGTTTACT GGCGGCCTTC CCATCGATCA TCTGCTACTG GTATCGCTTT AGCCACGATG GCGTGCGCAT CGATACCGAA ACCAACGATG AGCAAATCGG TGCCCACTTC CTGCACCTGC TGCACGGCAA AGCGCCATCG GCGCTGCACG CTAAGGTAAT GGACGTATCC TTAATTCTGT ATGCAGAGCA TGAGTTTAAC GCTTCAACCT TTACCGCCCG CGTGTGTGCA TCGACCCTAT CGGATATGCA TTCCTGCGTC ACAGGCGCTA TCGGCTCACT ACGTGGTCCG CTACACGGCG GCGCTAACGA AGCGGCAATG GAACTTATTC AAGACATGAA AGACGAAGCC GATGCCCGCG ATGTGCTCAT GGGTAAACTC GAGCGTAAAG AGAAGATCAT GGGCTTTGGT CACGCCATCT ACCGTGAGTC AGACCCACGT AACGCCATCA TCAAAGAATG GTCTGAAAAA CTGGCCGCCG ATTACGGCGA TGATCGTCTC TACCGCGTGT CAGTAGCCTG TGAAGCCCTG ATGTGGGAAC AGAAGAAACT CTTCTGTAAC GCCGACTTCT TCCACGCCAG TGCTTACCAC TTCATGGGCA TTCCAACCAA GCTATTTACC CCAATCTTCG TATGTTCACG GGTAACAGGC TGGACGGCGC ATGTGATGGA ACAACGCTCA AACAACCGCA TTATTCGCCC AAGTGCCGAC TATGTGGGTG TGGCGTTACG TAAAGTCGTG CCAATTTCGG ATCGTTAA
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Protein sequence | MSDAKKLSGA GLRGQSAGET ALSTVGVSGS GLTYRGYDVK DLAENATFEE VAHLILYGEL PTTAQLEAYK TKLKGMRGLP QALKEVLERI PADAHPMDVM RTGCSMLGNL EAEHSFSEQS QIADRLLAAF PSIICYWYRF SHDGVRIDTE TNDEQIGAHF LHLLHGKAPS ALHAKVMDVS LILYAEHEFN ASTFTARVCA STLSDMHSCV TGAIGSLRGP LHGGANEAAM ELIQDMKDEA DARDVLMGKL ERKEKIMGFG HAIYRESDPR NAIIKEWSEK LAADYGDDRL YRVSVACEAL MWEQKKLFCN ADFFHASAYH FMGIPTKLFT PIFVCSRVTG WTAHVMEQRS NNRIIRPSAD YVGVALRKVV PISDR
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