Gene Shewana3_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3826 
Symbol 
ID4480036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4593416 
End bp4594543 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content53% 
IMG OID639728439 
Productmethylcitrate synthase 
Protein accessionYP_871450 
Protein GI117922258 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG CAAAAAAATT AAGTGGTGCA GGATTACGTG GCCAGAGCGC GGGTGAAACC 
GCATTAAGTA CCGTAGGTGT ATCGGGCAGC GGCCTGACCT ACCGCGGTTA CGATGTGAAA
GATCTGGCCG AAAACGCGAC TTTTGAAGAA GTCGCCCACC TCATCCTCTA CGGTGAGTTG
CCAACCACAG CACAACTCGA AGCCTATAAA ACCAAATTAA AAGGCATGCG CGGCCTGCCA
CAGGCATTAA AAGAAGTGTT AGAGCGCATC CCTGCCGACG CCCACCCAAT GGATGTGATG
CGTACCGGTT GTTCTATGCT GGGTAACCTC GAAGCCGAGC ACAGCTTTAG CGAGCAAAGC
CAAATTGCCG ACCGTTTACT GGCGGCCTTC CCATCGATCA TCTGCTACTG GTATCGCTTT
AGCCACGATG GCGTGCGCAT CGATACCGAA ACCAACGATG AGCAAATCGG TGCCCACTTC
CTGCACCTGC TGCACGGCAA AGCGCCATCG GCGCTGCACG CTAAGGTAAT GGACGTATCC
TTAATTCTGT ATGCAGAGCA TGAGTTTAAC GCTTCAACCT TTACCGCCCG CGTGTGTGCA
TCGACCCTAT CGGATATGCA TTCCTGCGTC ACAGGCGCTA TCGGCTCACT ACGTGGTCCG
CTACACGGCG GCGCTAACGA AGCGGCAATG GAACTTATTC AAGACATGAA AGACGAAGCC
GATGCCCGCG ATGTGCTCAT GGGTAAACTC GAGCGTAAAG AGAAGATCAT GGGCTTTGGT
CACGCCATCT ACCGTGAGTC AGACCCACGT AACGCCATCA TCAAAGAATG GTCTGAAAAA
CTGGCCGCCG ATTACGGCGA TGATCGTCTC TACCGCGTGT CAGTAGCCTG TGAAGCCCTG
ATGTGGGAAC AGAAGAAACT CTTCTGTAAC GCCGACTTCT TCCACGCCAG TGCTTACCAC
TTCATGGGCA TTCCAACCAA GCTATTTACC CCAATCTTCG TATGTTCACG GGTAACAGGC
TGGACGGCGC ATGTGATGGA ACAACGCTCA AACAACCGCA TTATTCGCCC AAGTGCCGAC
TATGTGGGTG TGGCGTTACG TAAAGTCGTG CCAATTTCGG ATCGTTAA
 
Protein sequence
MSDAKKLSGA GLRGQSAGET ALSTVGVSGS GLTYRGYDVK DLAENATFEE VAHLILYGEL 
PTTAQLEAYK TKLKGMRGLP QALKEVLERI PADAHPMDVM RTGCSMLGNL EAEHSFSEQS
QIADRLLAAF PSIICYWYRF SHDGVRIDTE TNDEQIGAHF LHLLHGKAPS ALHAKVMDVS
LILYAEHEFN ASTFTARVCA STLSDMHSCV TGAIGSLRGP LHGGANEAAM ELIQDMKDEA
DARDVLMGKL ERKEKIMGFG HAIYRESDPR NAIIKEWSEK LAADYGDDRL YRVSVACEAL
MWEQKKLFCN ADFFHASAYH FMGIPTKLFT PIFVCSRVTG WTAHVMEQRS NNRIIRPSAD
YVGVALRKVV PISDR