Gene Shewana3_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3821 
Symbol 
ID4480031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4588724 
End bp4589617 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content48% 
IMG OID639728434 
Productputative acyltransferase 
Protein accessionYP_871445 
Protein GI117922253 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGC TGTTTTCACA ATTAAAAGGC TGCATTGCCT TCTTAGGCTA TGTCGTGAAT 
ACCTTGTTTT GGGTGATACC TATAGTGCTC GGCAGCCTGA TAAAGCTTAT CCCTCTGCCG
CCACTGAGAA CGGCCATCAG CTACTTTCTC GACTTTTGCG CGAGTGCCTG GATCAGCGTC
AATGGCGTGA TTGAACGAGT GCTGCACCCA GTCGACGTCG AACTCACGGG TGACACCCAA
TTCTCGACCA AAGAATGGTA TATGGTGATT GCTAACCATC AGTCCTGGGT AGATATTTTA
ATCCTGCAAC GGGTGTTTAA CCGCCGCATT CCCTTCCTGA AGTTCTTCCT CAAACAGGAA
CTGCTTTATG TGCCAGTATT AGGACTGGCA TGGTGGGCAT TAGACTTTCC CTTTATGCGC
CGCTATAGCA CGGCACAGCT GAAGAAAAAT CCAAAGCTTA AGGGAAAAGA TATTGAAATT
ACACGTAAAG CCTGCGCGAA ATTTAAGACA AAACCCGTCA GTGTGATGAA CTTTGTCGAG
GGCACGCGCT TTACTAAGGC TAAACATAAA AAGCAAAACT CACAGTTCCA ACATCTGTTA
AAACCCAAAG CGGGTGGCAT GGCCTTCGCG CTATCGGCGA TGGGAGAACA GATCCACAAG
TTAGTGGATG TTGCGATTTA CTACCCAGGC CCAGTCCCTA GCTTTTGGGA CTACCTGACA
GGCAAGCTGC CAAAGGTTAA AGTACACATC AAAGTGAGTG ATATCGCGCC GGACATGCGT
GGCGACTACA TGAATGACCG TGATTTCAAA ATTGGCTTCC AAGAACAATT GAACGACATT
TGGCTCGCTA AAGACCAAGT GCTCAGCCAA CTGGCGGACC AAGAAGTAAG GTAA
 
Protein sequence
MGTLFSQLKG CIAFLGYVVN TLFWVIPIVL GSLIKLIPLP PLRTAISYFL DFCASAWISV 
NGVIERVLHP VDVELTGDTQ FSTKEWYMVI ANHQSWVDIL ILQRVFNRRI PFLKFFLKQE
LLYVPVLGLA WWALDFPFMR RYSTAQLKKN PKLKGKDIEI TRKACAKFKT KPVSVMNFVE
GTRFTKAKHK KQNSQFQHLL KPKAGGMAFA LSAMGEQIHK LVDVAIYYPG PVPSFWDYLT
GKLPKVKVHI KVSDIAPDMR GDYMNDRDFK IGFQEQLNDI WLAKDQVLSQ LADQEVR