| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3817 |
|---|
| Symbol | |
|---|
| ID | 4480027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4584084 |
|---|
| End bp | 4585163 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639728430 |
|---|
| Product | putative signal transduction histidine kinase |
|---|
| Protein accession | YP_871441 |
|---|
| Protein GI | 117922249 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC ACTCAGTGCA AATAGAACAA AAAATCGCAT GGGTTTACCT GATAAACCTG
GCGTTTTACC TGATCCCGTT GTTTGTCACG CCCTATCCGA GCTGGCAAAT TGGACTCATT
TTAGCCGTAC TTATTCCCTT TATTTACAGC TACTTTTGGG CCTATCGCTG CCATACTCGT
GTGGCTTATC GACCCATCAG CGTCATGCTA TTACTGGCGA TTGCCATAAC ACCCATCAAT
CCTGGCTCTA TTTCTCTCTT TACCTTTGCC AGCTTCTTTA TTGGCTTCTT CTATCCACTC
AGAGTCAGCC TGCTAAGTTG GTTTGGAATT TTGGCTTTAT TGTTCTTACT CAACCACTTT
AGTCAGTTCA ACAATCTGTA TTTTCCGCTG TATGGCTCGG CGTTAGTTTT CGGCGTTGGC
ATGTTGGGGA TTGCCGAGCA AAAACGTTAT CAACATAGAT TAAAGGAGCG ACAAAGCGCG
CAGGAGATTA GCACCTTAGC GACCATGGTT GAACGGGAGC GTATCGCCAG AGACTTGCAC
GATATCATGG GACACAGTCT GTCATCGATT GCCCTAAAAG CTGAACTGGC GGAAAAACTG
CTCGCCAAAC AAGAATATCA ATTAGCGACC ACTCAGCTGC AGGAGCTAGG ACAAATCGCT
CGGGAGAGCT TGAGCCAAAT AAGGCATACA GTTTCAGATT ATAAACATAA AGGGCTGGCC
AGCTGCGTCA CTCAATTATG TCACTCCCTG AGGGACAAGG GCATCGCGGT GGAGCTGCTA
GGCGAGTTAC CCAAATTGTC CGCCAGAGCA GAGAGTCAAC TCGGTTTAGT GTTAACTGAG
CTGGTGAATA ATATTCTGCG CCACAGCAGC GCCAGCCAAT GCCGCATTCA GTTTCGCGAG
CAGGCCGATA GCCTTATCGT CGACGTGCAA GATAACGCCC CAACAAGCCC GATTATCGAG
GGTAACGGCC TCACAGGGAT CCGCGAGCGC CTCACTAGCC TTGGGGGACA TTTAAGCTAT
GATCTTGAAC AGGGATACGC CTTTAGCGTC AGTTTACCTT TGCAGGGAGC AACAGATTAA
|
|---|
| Protein sequence | MTQHSVQIEQ KIAWVYLINL AFYLIPLFVT PYPSWQIGLI LAVLIPFIYS YFWAYRCHTR
VAYRPISVML LLAIAITPIN PGSISLFTFA SFFIGFFYPL RVSLLSWFGI LALLFLLNHF
SQFNNLYFPL YGSALVFGVG MLGIAEQKRY QHRLKERQSA QEISTLATMV ERERIARDLH
DIMGHSLSSI ALKAELAEKL LAKQEYQLAT TQLQELGQIA RESLSQIRHT VSDYKHKGLA
SCVTQLCHSL RDKGIAVELL GELPKLSARA ESQLGLVLTE LVNNILRHSS ASQCRIQFRE
QADSLIVDVQ DNAPTSPIIE GNGLTGIRER LTSLGGHLSY DLEQGYAFSV SLPLQGATD
|
|---|
| |