Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3816 |
Symbol | |
ID | 4480026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4583296 |
End bp | 4584000 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728429 |
Product | TPR repeat-containing protein |
Protein accession | YP_871440 |
Protein GI | 117922248 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAT TCTTACTGTT ATCAAGCCTT GCCCTCGCCT GCGCGCCCGT ATTCGCGGCT TCCAACTCGA GTATCAATAT CGCAGAAGTC GACAAAGCGG CAAGCACCTT GAATATCGAA AAATTACAAC AGCTCAGCAC GACAACACAG GATTACGAAG CAGCCTATGC CAACTATCGT TTAGCCATCA GCGCCAATGT TATGGGGCAA AAAACCTTGG CGGAACAGGC CTTAACTTCG GCGCAAACCA GCTTAGAAGC CATCAACAAT ACCCAAGCCG ATGCCGAGTC CCTCGCACTA TTATCGTCCG TTTACGGCAT GCAAATCGCC TTGGATAACA GCAAAGGTGC CGAGCTTGTG AGCAAATCCG CCAATGCCAT CGCTCAAGCC GAACAGCTGG CACCGCTTAA TCCGCGGGTC GCATTAGTAA AAGCGATTGC CGCCTATAAT ACGCCCGCCA TGTTTGGTGG CAGCATGCAA GTTGCCAAGT CACTCGCCAG CAGCGCCATT GAACGGTTTA ATCAACCTTG CGAGGACATA TGCTGGGGTG AGGCCGAAGC TTACACTTGG CGCGGACTCG CAAAACAGGA ATTAGGCGAC GCCCAAGGGG CGATTGAAGA TTGGCAACAG GCGCTGCAAG TGGAAAAAGA TTATGGTTGG GCTAAGTTTT TACTTCAGCA AAATCAGCAA ATAAGTGCAA AATAA
|
Protein sequence | MKTFLLLSSL ALACAPVFAA SNSSINIAEV DKAASTLNIE KLQQLSTTTQ DYEAAYANYR LAISANVMGQ KTLAEQALTS AQTSLEAINN TQADAESLAL LSSVYGMQIA LDNSKGAELV SKSANAIAQA EQLAPLNPRV ALVKAIAAYN TPAMFGGSMQ VAKSLASSAI ERFNQPCEDI CWGEAEAYTW RGLAKQELGD AQGAIEDWQQ ALQVEKDYGW AKFLLQQNQQ ISAK
|
| |