| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3814 |
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| Symbol | |
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| ID | 4480024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4580334 |
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| End bp | 4581998 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728427 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_871438 |
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| Protein GI | 117922246 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.354824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG CGATTAAGAC GCCAGTTGAA ATGTTGGCGC ACTGGGCGAA TACACGTGGG
GATGAGATCT ATTTGCGCCA GCCCATCAAG GGTCAATACC TTGATTTCAC GTGGAATGAA
GTGCAAGAAA AAGTGCAGCA ACTCGCGGGT GCACTGCGCC ATTTAGGCTT AGAGCCGGGC
GATAAGATTG CCGTGCTCTC TAAAAACTGC GCCGAATGGT TTATTACCGA CCTCGCCTTG
ATGCACGGCG GCTATATCAG CGTTCCCATC TACCCCACCG CCAATACAGA TACTATCCGC
TATGTGTTGC AACATAGTGG TGCCAAAGCG ATTTTCCTCG GCAAGCTCGA CCACTGGGCC
GATCAAGAAG CCGGCGTCGG CGGTGAATTA CTCCGCCTTG CCATGCCCTA TGAGACCATG
CCGGCTCAAT ATCAGTGGGA GCAACTGCTG AAGATGGGCA ACCCTCTGAT TGAAGCGCCA
TTACCTGAGC TCGATCAGAC CATGACGCTG ATTTACACCT CGGGCTCAAC GGGCCAACCT
AAGGGCGCGA TTCAGACGTT TGCCAGCTAT GGCTGGACTT GCCAAGCGGT GGTGCGCGAT
CTGCGTACCA ATGGCAACGA CAGATTATTG TCCTACTTAC CGTTAGCGCA TATTACCGAG
CGTGTGGCGA TCGAAGGCTC ATCTTTTTAT TCTGGCAGCA CAGTCGCCTT CGTCGAAAGC
TTAGACTCCT TCGTTGCCGA TGTGCAGCGG GCTAAACCTA CGGTGTTTTT CTCGGTTCCG
CGACTGTGGA GCCTGTTCCA GAAGAACATT ATCGACAAGA TTGGTGTTGG CAAACTCAAT
CTATTGCTAA AAATCCCACT AATTAGCAGC CTAGTAAAAC ACAAGATCCA CAAAGGATTA
GGACTCAACC ATTGCCGCTT ACTCGGCTCT GGCTCGGCGC CTATTCCGCC CTCTCTTATT
CACTGGTACC ACAGCATTGG CTTGGATATC TGCGAAGCCT GGGGTATGAC GGAAAACTGT
GCTTACTCCA TCATCAACTA TCCCTTCGAT GTGCGCAAAA TCGGCACTGT GGGTAAACCC
GTGCAGGATT GCCAAATCCG CCAGGGTGAG GACGGCGAAC TGCTACTGAA GAGTCCCGGC
CTGATGACGG CCTATTATCT GCAACCCGAA GCAACAGCAG CGGCCTTCGA TCCCGATGGT
TTTTTCCATA CTGGCGACCT CTGCGCTATC GATGCCGATG GTTGTGTGAC TATCACTGGC
CGCGTGAAGG ACAACTTTAA AACCGCTAAG GGTAAATACG TCGCTCCAGT GCCAATTGAA
CGTAAGCTCG CGCAGGATCC CCATGTGGAG CTGATTTGCG TTATTGGTTC TGGTCTGCCG
CATCCCGTCG CATTAGTGCA ACTTTCCGAG GGCGCGACCT TACAAGCCCG CGAGGAAGTT
CGCACATCTT TAAAAGCGAC CCTCGATAGC GTGAACCCAC ATTTAGAGTC CCATGAGCAT
GTGGATGCGA TTGTGGTCGT GAACGAGCCT TGGACCATCG AAAACGATGT GCTAACTCCG
ACACTGAAGA TCAAACGTCA TGTGCTCGAG AAGGCATTTA GCGAGCGTGT CGACGGTATT
CGCGGTGCGC AAGTACGCTG GGAAGATGAG TTATCTGCAA AATAA
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| Protein sequence | MDNAIKTPVE MLAHWANTRG DEIYLRQPIK GQYLDFTWNE VQEKVQQLAG ALRHLGLEPG
DKIAVLSKNC AEWFITDLAL MHGGYISVPI YPTANTDTIR YVLQHSGAKA IFLGKLDHWA
DQEAGVGGEL LRLAMPYETM PAQYQWEQLL KMGNPLIEAP LPELDQTMTL IYTSGSTGQP
KGAIQTFASY GWTCQAVVRD LRTNGNDRLL SYLPLAHITE RVAIEGSSFY SGSTVAFVES
LDSFVADVQR AKPTVFFSVP RLWSLFQKNI IDKIGVGKLN LLLKIPLISS LVKHKIHKGL
GLNHCRLLGS GSAPIPPSLI HWYHSIGLDI CEAWGMTENC AYSIINYPFD VRKIGTVGKP
VQDCQIRQGE DGELLLKSPG LMTAYYLQPE ATAAAFDPDG FFHTGDLCAI DADGCVTITG
RVKDNFKTAK GKYVAPVPIE RKLAQDPHVE LICVIGSGLP HPVALVQLSE GATLQAREEV
RTSLKATLDS VNPHLESHEH VDAIVVVNEP WTIENDVLTP TLKIKRHVLE KAFSERVDGI
RGAQVRWEDE LSAK
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