| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3812 |
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| Symbol | |
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| ID | 4480022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4577593 |
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| End bp | 4579695 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728425 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_871436 |
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| Protein GI | 117922244 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0497071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA
GAATTGCTCA AGCAGGCGTA CCAAGTTGCG CGTGATGCCC ATGAAGGGCA AATGCGCACC
AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTTGCCC GCATCCTCGC CGAGATGCGT
CTCGATCACG AGACGCTGAT GGCTGCTTTG CTGCACGACA CCATCGAAGA TACCCATGTC
ACCAAAGAGG ACTTGGCCGA ACAATTTGGC GAAGCCGTGG CAGAGTTGGT TGAAGGGGTG
TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAAAAAGAAG CCCAAGCGGA AAACTTTCGC
AAAATGATGA TGGCAATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGT
ACCCACAACA TGCGTACCTT AGGTGCACTG CGCCCCGATA AACGCCGCCG CATTGCCCGC
GAAACCTTAG AGATTTACGC GCCGATTGCC AACCGACTCG GTATTCACAA TATCAAGACG
GAGTTAGAGG ATTTAGGCTT CCAAGCCTAT TATCCGATGC GCTATCGGGT GTTAAAGGAA
GTGGTCAAAG CTGCCCGTGG TAACCGTAAA GAACTCATTC AAGGTATTGA AGCTGCGGTA
TTAACTCGCC TAAACGATGC GGGCATTAAA GGCAAAGTGA AAGGTCGCGA GAAAAACCTC
TACTCCATCT ATAACAAGAT GCAGAGCAAG GAACTCCAGT TCCAAGAGGT GATGGATATC
TACGCCTTTC GCGTCATCGT CGACTCCATC GATACTTGCT ACCGCGTCCT CGGTGCTATG
CACGGCCTGT ATAAACCGCG TCCGGGTCGC TTTAAAGATT ATATCGCCAT CCCAAAAGCC
AACGGTTATC AGTCGCTACA TACCTCGTTA TTCGGCCCAC ACGGCGTGCC CGTCGAGATC
CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGACAAAG GGGTTGCGGC CCACTGGGCT
TACAAAGGCG GTGCCGATGG TCAAGGCACT ACCACGCAAG TGCGTGCCCG CAAGTGGATG
CAAAGCTTGC TGGAACTGCA ACAGAGCGCC AGCACCTCCT TCGAATTCGT GGAAAACGTT
AAAACCGAAC TCTTCCCCGA AGAGATTTAC GTCTTTACCC CCGAAGGTCG CATTTTAGAA
TTACCGGTTA ACGCCACCGC CGTCGACTTT GCCTATGAAG TCCACACCGA TGTGGGCAAT
ACCTGTGTCG GCGCCCGCGT TAACCGCCAA GCTTATCCGT TAAGCCAGCC ATTAATCTCC
GGCCAAACCG TTGAGATCAT TACCGCCAAA GGCGCGCGTC CGAATGCCGC TTGGCTTAAC
TTTGTGGTGA CGGGTAAAGC CCGCGCCAAA ATCCGCCAAG TGCTTAAGAG CCTAAAAGCA
GACGATGCTA TCGCCCTTGG CCGCCGTTTG CTAAACCATG CGCTGGGTAA AACCAAGCTC
GATAGTATTC CTGCCGAGCA AATTGATAAA GTCGTGCGCG ATACCAAGCA CGCCAATTTA
AATTCCTTAC TCGCCGACAT CGGTCTTGGC AATGCCATGA GCATAGTCAT CGCCCAACGT
TTGATTGGCG ATAATTTAGA GAATCAAGAG AGCCGCGATT CTCACCTGAT GCCAATCCGT
GGCGCCGAAG GTATGTTAGT GACCTTCGCC AACTGTTGCC GCCCGATCCC AGGTGATGCG
GTGATAGCCC ACGTGAGCCA AGGCAAAGGC TTAGTCGTCC ACATGGAAAA CTGCGCTAAC
ATTCGCGGTT ACCAAGGCGA GCCAGATAAA TATATTCCCG TACAGTGGGA CAATGTCGAA
GGCGTCGAAT ATCAAGCCAA TCTGCGGGTG GAAATTGTTA ACCACCAAGG CGCGCTGGCG
AAGATCACCT CGATTATCGC CGCCGAAGGT TCGAACATTC ACAACCTTAG CACCGAAGAG
CGCGATGGCC GCGTTTACTT GATTAACCTG CGGATTTCGG TGAAGGACAG GATCCATTTA
GCTAACGTGA TGCGCCGTAT CCGGGTACTG CCCGAGGTGT TACGTACATC CCGTAATCGT
TGA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR
LDHETLMAAL LHDTIEDTHV TKEDLAEQFG EAVAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL
YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGADGQGT TTQVRARKWM
QSLLELQQSA STSFEFVENV KTELFPEEIY VFTPEGRILE LPVNATAVDF AYEVHTDVGN
TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GARPNAAWLN FVVTGKARAK IRQVLKSLKA
DDAIALGRRL LNHALGKTKL DSIPAEQIDK VVRDTKHANL NSLLADIGLG NAMSIVIAQR
LIGDNLENQE SRDSHLMPIR GAEGMLVTFA NCCRPIPGDA VIAHVSQGKG LVVHMENCAN
IRGYQGEPDK YIPVQWDNVE GVEYQANLRV EIVNHQGALA KITSIIAAEG SNIHNLSTEE
RDGRVYLINL RISVKDRIHL ANVMRRIRVL PEVLRTSRNR
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