Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3811 |
Symbol | rpoZ |
ID | 4480021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4577271 |
End bp | 4577549 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728424 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_871435 |
Protein GI | 117922243 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.370537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA GAACAAATCG GCAACCGTTT TGATATGATC CTGGTTGCGG CGCGTCGTGC TCGCCAAATC GCCGTGCAGG GTAAAGACCC TATGGTTGAA GAGATGAACG ACAAGCCAAC GGTTATCGCC CTGCGTGAAA TCGAACTAGG TTTAGTGAAT GCTCACACTT TAGATGCTGA CGAGCGTCAA TCAGTGCGTG AGCGTGAAGC AGCTGAAATC GCAGCTGTTG CAGCCATCGC TGAAGGCCGT TCACTATAA
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Protein sequence | MARVTVEDAV EQIGNRFDMI LVAARRARQI AVQGKDPMVE EMNDKPTVIA LREIELGLVN AHTLDADERQ SVREREAAEI AAVAAIAEGR SL
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