| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3800 |
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| Symbol | |
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| ID | 4480010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4564982 |
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| End bp | 4565878 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728413 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_871424 |
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| Protein GI | 117922232 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000185965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT TCTCCGCCCT GCCCATTTTC GTCACTGTGG TGGAATGCGG TAGCTTTTCC
GCTGCGGGAC AAAAACTCGG GCTGAGTAAA TCAGCCATCA GCAAACGAAT CACACAGTTG
GAGCAACACT TAGGGATTCA ACTGTTACAA CGCACCACTC GCAGTTTGAG CCTAACGGAT
GCTGGCGCGC GCTATTTCGA ATATATTCGC CCCGCTGTGC AGCTCACCCA AGAAGGATTA
GATGCCATCT CCGAATTGCA GCAAACACCT AAAGGCAATC TGCGAATTTC CGTGCCTATG
GTGTTTGGCC GCTTGTATAT TGCACCTTTA ATCGCTGAGT TTTTAAAACG TTACCCCGAT
ATTCAGCTGC AAATGCAAAT GGATGATAAG ACCACGGATT TAATCGCAGG CGGCTTCGAT
TTAGCCATTC GCATCGGCGA ACTGCCCGAC TCCAGCCTTA TCGCCCGCAA AATTGCCCCT
TGTTTGAGCG TGATTTGCGC ATCCCCCGCA TATCTAGCGC AGCACGGTTC ACCCATGACT
CCTAGCGGGT TAACTCAGCA CAACTGTTTG TTTTACAGTT ACTTTCAAGA TGGTGTGGAA
TGGAGTTTCC ACAGTCCCTA TGGCGTGCAA CGTGTTCAAC CCAAAGGCAA TTATCAGGTG
AATAATAGCG ATGCTATCCA CCAAGCCTGT CTTGATGGCC TTGGTATCGC CAATCTGCCA
CGCTTTATCG TAGAGTCCGA CCTACAGGCT GGGCGTTTAC AAACGATACT GACTGACTTT
CCACTCCCCG AACATGGTAT TTATGCTGTG TATCCACAGC GAAAATACCT CCCAACCAAA
GTGACGGTAT TGATTGGTTT TTTGATGGAG AAATTGGCGA GTGGCAAGTT TGTATAA
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| Protein sequence | MEHFSALPIF VTVVECGSFS AAGQKLGLSK SAISKRITQL EQHLGIQLLQ RTTRSLSLTD
AGARYFEYIR PAVQLTQEGL DAISELQQTP KGNLRISVPM VFGRLYIAPL IAEFLKRYPD
IQLQMQMDDK TTDLIAGGFD LAIRIGELPD SSLIARKIAP CLSVICASPA YLAQHGSPMT
PSGLTQHNCL FYSYFQDGVE WSFHSPYGVQ RVQPKGNYQV NNSDAIHQAC LDGLGIANLP
RFIVESDLQA GRLQTILTDF PLPEHGIYAV YPQRKYLPTK VTVLIGFLME KLASGKFV
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