Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3799 |
Symbol | |
ID | 4480009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4564238 |
End bp | 4564729 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639728412 |
Product | hypothetical protein |
Protein accession | YP_871423 |
Protein GI | 117922231 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000162069 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGT CAAACAAACT GACCTTATTT ATGTCCTTTG TGGCGCTCTG CTCCGGCGTT TTACTGGCAT TAATGATTAA GCTCAATAGC CAGCTTGCTA TGTATAGCTC ACCGCTTTTG GCATCTTGGA TGGCTCATGG TATTGGGGCA ATAACAGTAT TGTTGATGCT GTTTTTACTG AGAAAAAGGC TGGTGGGTAA GGAAGCCAAG TCGACTTTGA ATGCCGATGC GAGTCGATCA TGGTTACCTT GGTGGGCGTA TTTAGGTGGT GTTCCTGGTG CTGCGACGGT TGTGTTGGCC GCTGTCACAG TCAACAGTGA ATTAGCCTTA GCTGGTACCT TAGCCTTGAT GCTTGTGGGG CAGTTAATCT TGAGCTGTAT ATTCGACTGT TGTGGTTATT TCGGTGTCGT TAAGCGGCGC ATTCGATTCA CAGAAGTCAT TGCTATGGTA ATGATTTTGT TGGGAGCCAT GTTAGTGATT TATTCACATT AG
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Protein sequence | MQTSNKLTLF MSFVALCSGV LLALMIKLNS QLAMYSSPLL ASWMAHGIGA ITVLLMLFLL RKRLVGKEAK STLNADASRS WLPWWAYLGG VPGAATVVLA AVTVNSELAL AGTLALMLVG QLILSCIFDC CGYFGVVKRR IRFTEVIAMV MILLGAMLVI YSH
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