Gene Shewana3_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3799 
Symbol 
ID4480009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4564238 
End bp4564729 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID639728412 
Producthypothetical protein 
Protein accessionYP_871423 
Protein GI117922231 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000162069 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGT CAAACAAACT GACCTTATTT ATGTCCTTTG TGGCGCTCTG CTCCGGCGTT 
TTACTGGCAT TAATGATTAA GCTCAATAGC CAGCTTGCTA TGTATAGCTC ACCGCTTTTG
GCATCTTGGA TGGCTCATGG TATTGGGGCA ATAACAGTAT TGTTGATGCT GTTTTTACTG
AGAAAAAGGC TGGTGGGTAA GGAAGCCAAG TCGACTTTGA ATGCCGATGC GAGTCGATCA
TGGTTACCTT GGTGGGCGTA TTTAGGTGGT GTTCCTGGTG CTGCGACGGT TGTGTTGGCC
GCTGTCACAG TCAACAGTGA ATTAGCCTTA GCTGGTACCT TAGCCTTGAT GCTTGTGGGG
CAGTTAATCT TGAGCTGTAT ATTCGACTGT TGTGGTTATT TCGGTGTCGT TAAGCGGCGC
ATTCGATTCA CAGAAGTCAT TGCTATGGTA ATGATTTTGT TGGGAGCCAT GTTAGTGATT
TATTCACATT AG
 
Protein sequence
MQTSNKLTLF MSFVALCSGV LLALMIKLNS QLAMYSSPLL ASWMAHGIGA ITVLLMLFLL 
RKRLVGKEAK STLNADASRS WLPWWAYLGG VPGAATVVLA AVTVNSELAL AGTLALMLVG
QLILSCIFDC CGYFGVVKRR IRFTEVIAMV MILLGAMLVI YSH