Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3795 |
Symbol | |
ID | 4480005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4561118 |
End bp | 4561792 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639728408 |
Product | HNH endonuclease |
Protein accession | YP_871419 |
Protein GI | 117922227 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.952639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAAT GGAAAAGGAC TAAAGCCGTT AAAGGTCAAA AACCGCTCTA CACATTTGAA GAAATTAGTG ATTCAACACT GCGGGTAACT CGTGATAATG ATGGGGAAAT TTTTGTTAGA GACTTCTCTA TTGGGGACCG CTTCATTACA TACGCCAAAC TCAAAGTTGA AATGGAGTCT TTGAACCCTA ACGGTGGTAG CGAGGAAAGC GGTTACTACT TAATTGTGAG AGAAGTTACC TCAAGTGGCA CAGGAAAGAA AACCGACGTC AGCGCACAAA ACCAAATCGA CAAACTATAT TTTGGGCAAG TAGATAACGA GGAATTCAAA TCTCCACAAG AAGTAGATGA TGGCGAAGTG TATACAGAAG GTTCAGTTAA GCGAGTACTT GTAAATAAAT ACGAAAGAGA CGCTAAGGCA AGAAAAGCTT GTATTGCGCA CCATGGGTGT CAGTGTAAAG TTTGCGGGTT CAACTTTTCA GAAACATATG GCTTGCACGG TGAAGGTTTT ATTGAGGTAC ATCATATAAC ACCGCTCAGT ACAATAAGTA AAAGCTATCA AGTCGATCCA ATTAACGACC TAATTCCTGT TTGCTCGAAT TGTCACTCTA TGCTCCATCG CGGAAAAGAG CCATTAAGTA TCGATGAGCT AACAAAGTTA GCAGATAAAA ATTAG
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Protein sequence | MLQWKRTKAV KGQKPLYTFE EISDSTLRVT RDNDGEIFVR DFSIGDRFIT YAKLKVEMES LNPNGGSEES GYYLIVREVT SSGTGKKTDV SAQNQIDKLY FGQVDNEEFK SPQEVDDGEV YTEGSVKRVL VNKYERDAKA RKACIAHHGC QCKVCGFNFS ETYGLHGEGF IEVHHITPLS TISKSYQVDP INDLIPVCSN CHSMLHRGKE PLSIDELTKL ADKN
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