Gene Shewana3_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3782 
Symbol 
ID4479992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4542160 
End bp4542978 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content41% 
IMG OID639728395 
Producthypothetical protein 
Protein accessionYP_871406 
Protein GI117922214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.756711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGTA TCAACAAGCA TAATTCAATA TTAATGATGT ATAAGGATCA TGCTTACCAT 
GTCTACAAAC CTCTAGCACA GGGACTAAAG CCACAACTTG TGGAGAAAAT CATTTCCAGC
TGTGAAGTCA TGTTAAGTCA CTACAGTAAA GTCATGGTGA TTAGAATCGA TTTACACCCA
CAGCAGTATT CTGCTGATAA CAATCTAATT AATCAGTTCC TTAAGCAACA GGCCAATGCG
CTATCTCAGC AATACAAATG TAAGGTGCAA TACCTATGTG CTAGAGAGCG ACATCACTCT
GAAATACAAC ACTATCATGT CGCCCTTATG CTCAGTGGAC ATAAAATTAA CTATCCACAC
AAACTGTTAA GTCAGCTTAA ATCACAATGG GAGCGAACTG GTGGAACAGC GTCATTAGTC
GATAATCCTT TCAACATAAT GTGTCGTGGG AATAAGCCCT CACTCAAGCA TGCTATTTAC
CGTCTCAGTT ACTTTGCCAA AACAGTGACA AAGGAGATCG GTATCAAAGC ACGTTCGTTT
CTGAGCAATA AAATCCAACC AGCAGTATCA TTTGACGATA GTAAAGATAC GCTCTTGGTT
GACCCTTTTA TTACGGCTCA AATCAATCAG CGCAGAGTAA AAGCCCAGCA TGCTGAGAGC
ACGATAAGAG AGGCCGTTAA ATCCATCAAG CCTGCCTTTG CTTGGTTTAC CGAAAGAAGC
CATGCCCAGC AACTGAAAGA ATCTATTCTG ACTCGGACAT CCAGTTTACA ACACCTTGTA
GATCCACTTT GTAGTGGATC ACACCTAAGA ACCCCTTGA
 
Protein sequence
MFCINKHNSI LMMYKDHAYH VYKPLAQGLK PQLVEKIISS CEVMLSHYSK VMVIRIDLHP 
QQYSADNNLI NQFLKQQANA LSQQYKCKVQ YLCARERHHS EIQHYHVALM LSGHKINYPH
KLLSQLKSQW ERTGGTASLV DNPFNIMCRG NKPSLKHAIY RLSYFAKTVT KEIGIKARSF
LSNKIQPAVS FDDSKDTLLV DPFITAQINQ RRVKAQHAES TIREAVKSIK PAFAWFTERS
HAQQLKESIL TRTSSLQHLV DPLCSGSHLR TP