Gene Shewana3_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3776 
SymbolpyrE 
ID4479986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4536571 
End bp4537218 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID639728389 
Productorotate phosphoribosyltransferase 
Protein accessionYP_871400 
Protein GI117922208 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.851332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTAG AGCGTCAGGT ACTGCGATTC 
GGTGAGTTTA CCCTTAAATC GGGCCGTATC AGTCCTTATT TCTTTAATGC GGGTTTATTC
AATACTGGAC GGGACCTTGC GCGTTTAGGA CGTTTTTACG CGGCGGCGTT AGTGGATTCA
GGCATAGAAT ACGATCTGTT GTTTGGCCCG GCTTACAAAG GTATTCCGAT TGCGACCACG
ACTGCGGTGG CTTTGTGCGA ACACCACGAT ATCGATATTC CCTATTGCTT TAACCGTAAA
GAGAAAAAAG ATCACGGTGA AGGTGGCAGC TTAGTCGGTA GCGAGCTTAA AGGTCGTGTA
ATGCTGGTGG ACGATGTGAT CACCGCGGGT ACGGCAATTC GTGAGTCGAT GGAAATCATC
GAGGCTCATC AGGCGCAGTT GGCTGGCGTA TTAATCGCGC TGGATAGACA AGAGAAGGGC
AAGGGCGAAC TGTCGGCCAT CCAAGAGGTT GAGCGTGATT TTGGCTGCGG TATTGTGGCG
ATCATCAAGC TTGCGGATCT GATCAGCTAC CTGTCAGAAA AACCGGGTAT GGAAGCGCAA
CTGGCGGCAG TAAGCCAGTA CCGTGAGCAG TATGGCATCG AGGCCTAA
 
Protein sequence
MKAYQREFIE FALERQVLRF GEFTLKSGRI SPYFFNAGLF NTGRDLARLG RFYAAALVDS 
GIEYDLLFGP AYKGIPIATT TAVALCEHHD IDIPYCFNRK EKKDHGEGGS LVGSELKGRV
MLVDDVITAG TAIRESMEII EAHQAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA
IIKLADLISY LSEKPGMEAQ LAAVSQYREQ YGIEA