Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3776 |
Symbol | pyrE |
ID | 4479986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4536571 |
End bp | 4537218 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728389 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_871400 |
Protein GI | 117922208 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.851332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTAG AGCGTCAGGT ACTGCGATTC GGTGAGTTTA CCCTTAAATC GGGCCGTATC AGTCCTTATT TCTTTAATGC GGGTTTATTC AATACTGGAC GGGACCTTGC GCGTTTAGGA CGTTTTTACG CGGCGGCGTT AGTGGATTCA GGCATAGAAT ACGATCTGTT GTTTGGCCCG GCTTACAAAG GTATTCCGAT TGCGACCACG ACTGCGGTGG CTTTGTGCGA ACACCACGAT ATCGATATTC CCTATTGCTT TAACCGTAAA GAGAAAAAAG ATCACGGTGA AGGTGGCAGC TTAGTCGGTA GCGAGCTTAA AGGTCGTGTA ATGCTGGTGG ACGATGTGAT CACCGCGGGT ACGGCAATTC GTGAGTCGAT GGAAATCATC GAGGCTCATC AGGCGCAGTT GGCTGGCGTA TTAATCGCGC TGGATAGACA AGAGAAGGGC AAGGGCGAAC TGTCGGCCAT CCAAGAGGTT GAGCGTGATT TTGGCTGCGG TATTGTGGCG ATCATCAAGC TTGCGGATCT GATCAGCTAC CTGTCAGAAA AACCGGGTAT GGAAGCGCAA CTGGCGGCAG TAAGCCAGTA CCGTGAGCAG TATGGCATCG AGGCCTAA
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Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRI SPYFFNAGLF NTGRDLARLG RFYAAALVDS GIEYDLLFGP AYKGIPIATT TAVALCEHHD IDIPYCFNRK EKKDHGEGGS LVGSELKGRV MLVDDVITAG TAIRESMEII EAHQAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA IIKLADLISY LSEKPGMEAQ LAAVSQYREQ YGIEA
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