Gene Shewana3_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3774 
Symbol 
ID4479984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4533574 
End bp4535559 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content47% 
IMG OID639728387 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_871398 
Protein GI117922206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.455998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT TGCCATTTGC TGCATTGGCC GTAATTTGCT TGCCTATTAT GCCTTTCAGC 
ACATTCGCGG CCGAAACCTC GGCGACAAAT GCCCTATCAC AATCCCAATT ATTCAGTCGC
GGTAACGAGT ACTCTAACGT CAAGATCTCG CCTACCGGCA AATACTTAAG TGCAATTACC
AGTGTTGAGG GTAAAAATGT ACTTATAGTA TTGGATGCTC AAACCAAAAA ACTGCTGAAT
GCGATTCGCT TCCCAAGTAA CGCACAGGTA GGCACCTATG AATGGGCCAA TAGCGAGCGC
ATTGTACTGG CAAAAGAATA CCTTAAGGGT TGGACCGATG TACCCCAATA CTACGGCGAA
TTAATGGCGG TCAACGCCGA TGGTTCTCGC CCTAAATATC TATTTGGATA TAACAGCGGC
GAGCAACAAA CAGGTTCAAA TATCAAGAAA AACACAGCCA TAAGTGCCAC AGCATTCATT
CTGGATCCTC TACCGGATGA TGAACGCTAT ATGCTGGTCA ATGCGCTCCC GTGGACTGGA
GCCCCAGACT TGAGTGAAAC TCCTCAGGAT GTCTACCGCG TTGACCTTTT TAGCGGGGTT
CGTAAACGCA TAACTGGCTC CCCCATTGGC CGAGCACGCT TTATGACTGA CCATGATGGT
GAAGTCCGCT TTGTGGCAGG GGAAGATGGC AAAAACATCA CTAAAGTCTT TTACCGCAAA
GATGGCGAAT GGATAAACAC CGACAAACTT AACCTTGGCT TAAGTGATTT TACGCCTATC
TCTTTCGCTG ATAATAAAAA TACCATCTAT GCAGCGGGTC GAGTGGGCAC TGAAACCTTA
GGCGTCTATC GCATCAATCT CGAAACGGGT GAGAAGGCCG AGATCATTCA AGATGAGGTC
GTTGATCCCA GCAACTTCTG GATCAACGGC ACCAATAAGC AGCTGTATGC CGTAGAGTTT
GAAAATGGCT ATCCCAGTTA TGCCTTTGTC GATAACAACG ACAATCACGC CAAACTGCTT
AAGGATTTAA TTGCTGCTCT ACCTGGCCAT CAAGTACGAA TTGTCAGCGA AACCCGTAAT
GGCGAGCAAC TGGTGGTGAT TGCATTTAAC GATCGCAATC CTGGTGATTA CTATGTGTTT
GATACGAAAA AGCTCAAGCT AGAGTATCTA GCCGCCGCCC GCAAATGGCT CGACCCCGAA
AAAATGGCGG AGGTTAAACC TATTAGTTTC ACCAACCGCG ATGGCCAAAT AATCCATGGC
TATTTAACCT TACCCTTCGG CAAAGAAGCC AAGAATTTAC CCTTGGTCGT CAATCCCCAT
GGTGGTCCCC ATGGCATTCG TGACTGGTGG GGCTTTGACC CACAAAACCA ACTACTCGCT
CAAAATGGTA TGGCGGTATT GCAGGTTAAC TTCCGCGGCT CAGGTGGTTA TGGCGAGCGT
TTCGAGCAAG CAGGCTATCA AAAGTGGGGT TCGGATATTC AGCACGATAT TATCGATGCA
ACTCAATATG TGATTGATCA AGGCTTTGCC GATAAGGAAC GGGTGTGTAT CGCAGGCGGT
AGCTTTGGCG GCTATAGCGC ACTACAAAGC GCCGTATTAG CGCCCGATAT GTTTAAATGC
GCGGTTGGGT TTGCCGGTGT GTATGATCTG GAGTTGATGT TTGATGAAGG AGACGTCGCC
AGAACACGTT CAGGCACAAG CTATCTTAAG GACGTACTCG GCCAAGACAA AGCCACCCTA
AAAGCCATGT CTCCCTCTGA GAACGTTGCT AAATTAAAAG CGAACCTCTT ACTGGTGCAC
GGTGGTGACG ATGAGCGAGC GCCGATTGAA CAGCTCGAAT CACTCGAAAA AGCCCTCAAA
GCCCATAATT ATCCCTACCA AAAACTGGTG ATGGATAACG AAGGCCATGG TTTTTATAAC
GATGAGCATA GAGCCAAGTA TTACGATCAG ATGCTGAGCT TCTTAAAAAC CAACTTAAAA
CTTTAG
 
Protein sequence
MKSLPFAALA VICLPIMPFS TFAAETSATN ALSQSQLFSR GNEYSNVKIS PTGKYLSAIT 
SVEGKNVLIV LDAQTKKLLN AIRFPSNAQV GTYEWANSER IVLAKEYLKG WTDVPQYYGE
LMAVNADGSR PKYLFGYNSG EQQTGSNIKK NTAISATAFI LDPLPDDERY MLVNALPWTG
APDLSETPQD VYRVDLFSGV RKRITGSPIG RARFMTDHDG EVRFVAGEDG KNITKVFYRK
DGEWINTDKL NLGLSDFTPI SFADNKNTIY AAGRVGTETL GVYRINLETG EKAEIIQDEV
VDPSNFWING TNKQLYAVEF ENGYPSYAFV DNNDNHAKLL KDLIAALPGH QVRIVSETRN
GEQLVVIAFN DRNPGDYYVF DTKKLKLEYL AAARKWLDPE KMAEVKPISF TNRDGQIIHG
YLTLPFGKEA KNLPLVVNPH GGPHGIRDWW GFDPQNQLLA QNGMAVLQVN FRGSGGYGER
FEQAGYQKWG SDIQHDIIDA TQYVIDQGFA DKERVCIAGG SFGGYSALQS AVLAPDMFKC
AVGFAGVYDL ELMFDEGDVA RTRSGTSYLK DVLGQDKATL KAMSPSENVA KLKANLLLVH
GGDDERAPIE QLESLEKALK AHNYPYQKLV MDNEGHGFYN DEHRAKYYDQ MLSFLKTNLK
L