Gene Shewana3_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3771 
Symbol 
ID4479981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4531126 
End bp4532355 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content52% 
IMG OID639728384 
Productphosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase 
Protein accessionYP_871395 
Protein GI117922203 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.691668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCTG TGAGCCTGAT AACGAAAAAC GTCCTACTGG GTATTGGTGG CGGCATAGCG 
GCCTACAAAA GTGCGGATTT AGTGCGCCGC TTAAAAGAAC GCGGCTTTGA TGTGCGAGTG
GTGATGAGCC AGAGTGCCAT GGAATTTATT ACCCCTCTCA CTCTGCAAGC CTTATCAGGC
CATCCCGTGG CATCAAGCTT ACTCGATCCG GCGGCCGAAG CGGCAATGGG TCATATCGAA
CTCGCGCGCT GGGCGGATTT AGTTATTATC GCCCCCGCCA CCGCGAATTT GCTGGCCCGT
ATCAATGCGG GCATGGCGGA TGAGCTTATC ACCACCACTT GTCTTGCGAC CGAAGCACCG
ATAGCCCTGT GTCCCGCGAT GAATCAGCAG ATGTATCGCA ATGTCGCAAC CCAAGCCAAT
TTAGCGAGTT TACAAGGCCG AGGTTATACC CTGTGGGGCC CCGCCAGCGG CAGCCAAGCC
TGTGGCGAAG TAGGCCCTGG TCGTATGCTC GAACCGTTAG AAATCGCAGA ATTAGCCAGT
CGCTTTTTTG CAACAAAAGA TGTCTATGCT GAACAGGAAA CTCAGCCGCT AGCGGGCCAG
TCGGTGCTCA TTACCGCAGG ACCAACCCGC GAAGCCATCG ATCCGGTGCG TTATATCTCT
AATCACAGCT CAGGCAAGAT GGGATTCGCC TTAGCGAAAG CCGCCGCCGA CATGGGCGCC
GCTGTGACCT TGGTCTCAGG TCCAGTAAAT TTAGCCACCC CAGAGGGGGT GACGCGAATC
GATGTCGAAT CGGCACAAAA TATGCTCGAC GCGGTGATGG ATAATGTTGA TAAAAAAGAT
ATTTTCATTG GCTGCGCGGC GGTTGCCGAC TATCGCGTCA GTGATATTGC GGACTGTAAG
ATCAAAAAGT CCAGTGAGGA AATGCAACTT GCGCTGGTGA GGAATCCTGA TATCTTAGCG
ACGGTCGCAA GCTTGGCAAA CCGTCCTTTT GTGGTGGGAT TTGCCGCCGA AACCCATGAT
GTAGAAGCCT ACGCCCGCGA TAAACTCAAA CGCAAAAATT TGAATATGAT CGCCGCAAAC
GATGTATCCG TTGCTGGTCT TGGCTTTAAT GCCGATGCCA ATGCCCTGCG TGTATTCTGG
CCGCAGGGTA GTCAAGATTT GCCTGCTACC GATAAGCTCA CGTTGGCTCG GCAATTACTT
TCGTTGATAG TGAAAGAAAA AACAAAATAA
 
Protein sequence
MMSVSLITKN VLLGIGGGIA AYKSADLVRR LKERGFDVRV VMSQSAMEFI TPLTLQALSG 
HPVASSLLDP AAEAAMGHIE LARWADLVII APATANLLAR INAGMADELI TTTCLATEAP
IALCPAMNQQ MYRNVATQAN LASLQGRGYT LWGPASGSQA CGEVGPGRML EPLEIAELAS
RFFATKDVYA EQETQPLAGQ SVLITAGPTR EAIDPVRYIS NHSSGKMGFA LAKAAADMGA
AVTLVSGPVN LATPEGVTRI DVESAQNMLD AVMDNVDKKD IFIGCAAVAD YRVSDIADCK
IKKSSEEMQL ALVRNPDILA TVASLANRPF VVGFAAETHD VEAYARDKLK RKNLNMIAAN
DVSVAGLGFN ADANALRVFW PQGSQDLPAT DKLTLARQLL SLIVKEKTK