| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3764 |
|---|
| Symbol | |
|---|
| ID | 4479974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4525896 |
|---|
| End bp | 4526360 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639728377 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871388 |
|---|
| Protein GI | 117922196 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.337752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACC CAATTCAAGC CGAAGTACTC AAACGTGTTG CCGAAGTGTT TGATCAGCAC
GTGCCGTTTC ATAATTTATT GGGTCTGGAT ATCAAACGCT ACGACATAGA TGGCGTCGAA
GTGGTGATTA ATATGAAGCC TGAGCTCATT GGCAATATTC ACCAACAAAT TCTCCACGGT
GGCGTCACCG CCACAGTGCT CGATGTGGTC GGAGGGCTCA CCGCCTTTGC AGGACTGGTT
GCGAGTCGTG ATGATTGGAC TGTGGAGGAG TTACAACAAC GGTTGCAGAC CTTAGGCACT
ATCGATATGC GCGTCGATTA TCTGCGCCCC GGGCGTGGAC AGATTTTCAC AGGCACGGGC
AGCGTGATCC GTGCCGGCAA TCGCGTCTCA GTGTGTCGCA TGGAGCTTCA CAACGAGCAA
GGAACCCATA TCGCCTTCGG CACTGGCACT TATATGGTTG GCTAG
|
|---|
| Protein sequence | MTNPIQAEVL KRVAEVFDQH VPFHNLLGLD IKRYDIDGVE VVINMKPELI GNIHQQILHG
GVTATVLDVV GGLTAFAGLV ASRDDWTVEE LQQRLQTLGT IDMRVDYLRP GRGQIFTGTG
SVIRAGNRVS VCRMELHNEQ GTHIAFGTGT YMVG
|
|---|
| |