Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3761 |
Symbol | |
ID | 4479971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4519974 |
End bp | 4521542 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728374 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_871385 |
Protein GI | 117922193 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.211233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACA GAGTAATTAT ATTTGATACC ACCTTACGTG ATGGCGAGCA GGCGTTAGCG GCAAGCCTGT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGTTAGAACG TCTCGGTGTA GATGTAATGG AAGTCGGGTT TCCCGTGTCT TCCCCCGGTG ACTTTGAGTC GGTGCAGACT ATTGCCCGTA CCATCAAAAA TAGCCGTGTG TGCGCCTTAT CCCGCGCCTT GGAAAAAGAT ATCGATGCCG CCGCCCAAGC ATTATCGGTT GCCGAACAGT TCCGTATTCA TACCTTTATC TCCACCTCGA CTATCCATGT GGAGAGCAAG TTAAAGCGCT CATTCGAGCA AGTGTTGGAG ATGGCGGTGG GCGCGGTGAA ATATGCCCGC AGGTTTACCG ATGATGTAGA GTTTTCCTGC GAAGATGCGG GACGCACACC AATCGACAAC CTGTGCCGTA TGGTAGAAGC GGCGATTCAC GCAGGGGCTC GTACCATCAA TATCCCTGAT ACCGTGGGTT ACACAGTGCC AAGCGAGTTT GGGGGTATTA TTCAAACCTT GTTTAATCGC GTACCGAATA TCGACCAAGC CATTATCTCG GTTCACTGCC ATGATGACTT AGGCATGTCG GTGGCCAATT CGATTACCGC CGTGCAGCAT GGTGCCCGCC AAATCGAATG TACCATGAAC GGCATTGGTG AGCGTGCGGG TAACTGCTCC CTAGAAGAAA TCGCCATGAT CTTAGCGACG CGTAAGAATC TGTTGGGAGT TGAAACTGGG ATCAATGCCA AGGAGATCCA CCGTACGTCG AATCTGGTCA GCCAGTTGTG CAATATGCCG ATTCAGTCGA ATAAGGCGAT TGTGGGCGCG AATGCCTTTA CCCACTCTTC GGGGATTCAC CAAGATGGCA TGTTAAAAGC GCAAAACACC TATGAAATCA TGACGCCAGA GAGCATCGGC CTAAACCGTA ACAACCTGAA TATGACCTCG CGCTCAGGTC GCCATGTGAT TAAGCATCGC ATGGAGGAAA TGGGCTACAG CGAGCAGGAT TTCAATCTGG ATGCCCTGTA CGAACAGTTT TTACATTTGG CCGATAAAAA GGGTCAAGTC TTCGATTACG ACTTAGAAGC CTTAGCCTTT ATGGAAGCGC AAGCGGCGGA AGATAACTTC TATCAATTAC AGCAGTTAGT GGTGCAATCC GACTCCACCG AAGGCGTGGC CACGGCTACT GTACGCATCG ATGTCGGCGG AGAAATTAAA ACCGAAGCTG CGACCGGTAA TGGTCCCGTC GATGCCGCCT ATAACGCCAT TGCCCGTGCG ACGGACCGTC GTATCGATAT CATCAGTTAC AAATTGGGCG CTAAGGGTGA GGGGCAAAAT GCCCTGGGCC AAGTCGACAT TACCGCGGTT TACCATGAAC AAAATTTTCA CGGTGTTGGG TTAGCTACCG ATGTGGTTGA GGCATCAGCC CGTGCGTTAG TGCATGTGAT GAACCTGACG TGCCGTGCCG ATAAGGTCGC AGATTACAAA CAGAATATGC ATAAAAACAG AGAGCTGGGT GGCGTATAA
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Protein sequence | MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT IARTIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSTIHVESK LKRSFEQVLE MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIH AGARTINIPD TVGYTVPSEF GGIIQTLFNR VPNIDQAIIS VHCHDDLGMS VANSITAVQH GARQIECTMN GIGERAGNCS LEEIAMILAT RKNLLGVETG INAKEIHRTS NLVSQLCNMP IQSNKAIVGA NAFTHSSGIH QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEQD FNLDALYEQF LHLADKKGQV FDYDLEALAF MEAQAAEDNF YQLQQLVVQS DSTEGVATAT VRIDVGGEIK TEAATGNGPV DAAYNAIARA TDRRIDIISY KLGAKGEGQN ALGQVDITAV YHEQNFHGVG LATDVVEASA RALVHVMNLT CRADKVADYK QNMHKNRELG GV
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