Gene Shewana3_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3761 
Symbol 
ID4479971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4519974 
End bp4521542 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content51% 
IMG OID639728374 
Product2-isopropylmalate synthase 
Protein accessionYP_871385 
Protein GI117922193 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.211233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACA GAGTAATTAT ATTTGATACC ACCTTACGTG ATGGCGAGCA GGCGTTAGCG 
GCAAGCCTGT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGTTAGAACG TCTCGGTGTA
GATGTAATGG AAGTCGGGTT TCCCGTGTCT TCCCCCGGTG ACTTTGAGTC GGTGCAGACT
ATTGCCCGTA CCATCAAAAA TAGCCGTGTG TGCGCCTTAT CCCGCGCCTT GGAAAAAGAT
ATCGATGCCG CCGCCCAAGC ATTATCGGTT GCCGAACAGT TCCGTATTCA TACCTTTATC
TCCACCTCGA CTATCCATGT GGAGAGCAAG TTAAAGCGCT CATTCGAGCA AGTGTTGGAG
ATGGCGGTGG GCGCGGTGAA ATATGCCCGC AGGTTTACCG ATGATGTAGA GTTTTCCTGC
GAAGATGCGG GACGCACACC AATCGACAAC CTGTGCCGTA TGGTAGAAGC GGCGATTCAC
GCAGGGGCTC GTACCATCAA TATCCCTGAT ACCGTGGGTT ACACAGTGCC AAGCGAGTTT
GGGGGTATTA TTCAAACCTT GTTTAATCGC GTACCGAATA TCGACCAAGC CATTATCTCG
GTTCACTGCC ATGATGACTT AGGCATGTCG GTGGCCAATT CGATTACCGC CGTGCAGCAT
GGTGCCCGCC AAATCGAATG TACCATGAAC GGCATTGGTG AGCGTGCGGG TAACTGCTCC
CTAGAAGAAA TCGCCATGAT CTTAGCGACG CGTAAGAATC TGTTGGGAGT TGAAACTGGG
ATCAATGCCA AGGAGATCCA CCGTACGTCG AATCTGGTCA GCCAGTTGTG CAATATGCCG
ATTCAGTCGA ATAAGGCGAT TGTGGGCGCG AATGCCTTTA CCCACTCTTC GGGGATTCAC
CAAGATGGCA TGTTAAAAGC GCAAAACACC TATGAAATCA TGACGCCAGA GAGCATCGGC
CTAAACCGTA ACAACCTGAA TATGACCTCG CGCTCAGGTC GCCATGTGAT TAAGCATCGC
ATGGAGGAAA TGGGCTACAG CGAGCAGGAT TTCAATCTGG ATGCCCTGTA CGAACAGTTT
TTACATTTGG CCGATAAAAA GGGTCAAGTC TTCGATTACG ACTTAGAAGC CTTAGCCTTT
ATGGAAGCGC AAGCGGCGGA AGATAACTTC TATCAATTAC AGCAGTTAGT GGTGCAATCC
GACTCCACCG AAGGCGTGGC CACGGCTACT GTACGCATCG ATGTCGGCGG AGAAATTAAA
ACCGAAGCTG CGACCGGTAA TGGTCCCGTC GATGCCGCCT ATAACGCCAT TGCCCGTGCG
ACGGACCGTC GTATCGATAT CATCAGTTAC AAATTGGGCG CTAAGGGTGA GGGGCAAAAT
GCCCTGGGCC AAGTCGACAT TACCGCGGTT TACCATGAAC AAAATTTTCA CGGTGTTGGG
TTAGCTACCG ATGTGGTTGA GGCATCAGCC CGTGCGTTAG TGCATGTGAT GAACCTGACG
TGCCGTGCCG ATAAGGTCGC AGATTACAAA CAGAATATGC ATAAAAACAG AGAGCTGGGT
GGCGTATAA
 
Protein sequence
MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT 
IARTIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSTIHVESK LKRSFEQVLE
MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIH AGARTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDQAIIS VHCHDDLGMS VANSITAVQH GARQIECTMN GIGERAGNCS
LEEIAMILAT RKNLLGVETG INAKEIHRTS NLVSQLCNMP IQSNKAIVGA NAFTHSSGIH
QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEQD FNLDALYEQF
LHLADKKGQV FDYDLEALAF MEAQAAEDNF YQLQQLVVQS DSTEGVATAT VRIDVGGEIK
TEAATGNGPV DAAYNAIARA TDRRIDIISY KLGAKGEGQN ALGQVDITAV YHEQNFHGVG
LATDVVEASA RALVHVMNLT CRADKVADYK QNMHKNRELG GV