Gene Shewana3_3756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3756 
Symbol 
ID4479966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4513224 
End bp4514708 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content52% 
IMG OID639728369 
Productglycerol kinase 
Protein accessionYP_871380 
Protein GI117922188 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0928777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAAA AATACGTAGT GGCGTTAGAC CAAGGCACAA CCAGCTCAAG GGCGATTGTG 
TTTGACCACG ATGCCAATAT TGTCAGCGTC TCGCAGCGGG AGTTTACTCA GCTTTACCCA
AACCCCGGCT GGGTGGAGCA TGATCCCATG GAGATCTGGG CGAGCCAAAG TTCGGTGTTG
ATCGAATCCC TTGCCAGAGC GGGCATTCAC AGCGATGAAG TGGCAGCCAT TGGTATCACC
AATCAGCGCG AAACCACCAT TATCTGGGAA AAGGACACAG GCAAGCCCGT TTATAACGCC
ATTGTGTGGC AGTGTCGTCG CAGCTCAGAG ATCTGCGAGC AACTCAAGGC CCAAGGCTTA
GAAGATTATG TGCGAGAGAA TACGGGACTG CTGCTCGACC CTTATTTTTC AGGCACTAAG
ATCAAATGGA TCCTCGATAA TGTGCCGGAT GCGCGTGCGA AGGCCAAACG AGGCGAACTC
TTATTCGGCA CGGTCGATAC TTGGTTGCTG TGGAAACTCA CCGAAGGCAA AGTACATGTG
ACCGACCCCA CCAATGCTGC CCGTACGCTG CTGTTTAATA TCCATAGCCT GAGCTGGGAT
ACTAAACTGC TCGAAGCACT CGATATTCCT GCGGCCATGC TGCCTGAGGT GAAACCCTCC
TGCAGTGTCT ATGGCACAAC CCGTATTGCC GGTGAGGGCA GCGAAATTCC ACTCGCGGGG
ATCGCGGGTG ACCAACAGGC GGCACTCTTT GGTCAGCTTT GTGTCGAGCC GGGAATGGCT
AAAAACACTT ATGGCACTGG CTGCTTTTTA TTAATGAATA CAGGCAATAA AGCCGTACGT
TCATCCCATG GGTTATTAAC CACAGTGGCG GTAGGCGCTC AAGGTGAAGT GAATTATGCC
CTTGAAGGCT CAGTGTTTAT GGGCGGCGCG ACCATACAAT GGTTGCGGGA TGAGCTGGGG
CTTATTCGCG ATGCCAGCGA TACCGAATAT TTTGCCTCTA AAGTCGCGGA TACCAATGGG
GTGTATTTAG TGCCAGCTTT TGTTGGGCTT GGCGCTCCCT ATTGGGATCC TAATGCCCGT
GGCGCACTGT TTGGGTTAAC GCGCGGCGCT AACCGTAATC ATATTATCCG TGCGGCATTA
GAGTCGATTG CCTACCAGAG TAAGGATTTA CTCGATGCCA TGATTAAGGA CAGTGGTGAG
CGGCTTAAAT CCCTTAAGGT GGATGGTGGT GCGGTTGCTA ATGACTTCCT CATGCAATTT
CAAGCGGATA TCACCGACGT TGAAGTTTTA AGACCGAGTG TGTGTGAGAC TACCGCGCTT
GGCGCAGCCT TTTTAGCGGG ACTGGCGGTT GGCTTTTGGA CCTCAGTGAC CGAACTTAAG
TATAAGGCCT GTATCGATAA ACACTTCAAA CCGAATATTG ATGCGAGTCA AAGGGAGCGG
TTATATGCGG GCTGGCAAGA TGCGGTGGCG AGAACCCGTT CTTAG
 
Protein sequence
MQKKYVVALD QGTTSSRAIV FDHDANIVSV SQREFTQLYP NPGWVEHDPM EIWASQSSVL 
IESLARAGIH SDEVAAIGIT NQRETTIIWE KDTGKPVYNA IVWQCRRSSE ICEQLKAQGL
EDYVRENTGL LLDPYFSGTK IKWILDNVPD ARAKAKRGEL LFGTVDTWLL WKLTEGKVHV
TDPTNAARTL LFNIHSLSWD TKLLEALDIP AAMLPEVKPS CSVYGTTRIA GEGSEIPLAG
IAGDQQAALF GQLCVEPGMA KNTYGTGCFL LMNTGNKAVR SSHGLLTTVA VGAQGEVNYA
LEGSVFMGGA TIQWLRDELG LIRDASDTEY FASKVADTNG VYLVPAFVGL GAPYWDPNAR
GALFGLTRGA NRNHIIRAAL ESIAYQSKDL LDAMIKDSGE RLKSLKVDGG AVANDFLMQF
QADITDVEVL RPSVCETTAL GAAFLAGLAV GFWTSVTELK YKACIDKHFK PNIDASQRER
LYAGWQDAVA RTRS